Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624641

Identifier: 167624641

GI number: 167624641

Start: 3300749

End: 3301231

Strand: Reverse

Name: 167624641

Synonym: Shal_2723

Alternate gene names: NA

Gene position: 3301231-3300749 (Counterclockwise)

Preceding gene: 167624642

Following gene: 167624640

Centisome position: 63.16

GC content: 48.24

Gene sequence:

>483_bases
ATGGCCGCCGGGGGCGACGTCCTCTGGTTGGTAGCGGCAGTGTTGTTTGCTATGTGGGTATTGATGCTTGAGCGTTACTG
GTATCTCAATTGGGTATCACCAAAAGCGCACAAAGCAATCATTACGGCATGGGAAGCGCGAGAGGATTCAACCTCTTGGT
ACGCACACCGCATCCGTGAAGCTTGGGTATCCCAAGCGAAGCAAGATTTAACTGCACGTATGCTGCTTATCAAAACCTTA
GTTGCTATCTGTCCTATGATAGGTCTACTAGGTACCGTAACCGGTATGATTTCAGTGTTCGATGTGATGGCAGTTCATGG
GACGAGTAATGCTCGTATGATGGCAGCTGGTATTTCAATGGCGACCATGCCGACAATGGCTGGAATGGTCGCAGCATTAT
CGGGAGTATTCTTTAGTACTCGTCTCGATGCGAAAATGAAAATCAGTTTAGCAAAGCTAAAAGACAGCATGCCTCACCAC
TAG

Upstream 100 bases:

>100_bases
TCCTTGAAGAGCAAAGCGCGGGTATCGTTGCATCGCACGCTGAGAAGAGGAAAGCCTAATGTTATTCCTGATGGATATGT
GGGATTCCGTCAGGGGCTTC

Downstream 100 bases:

>100_bases
AGAGAGATTGAACATGGCACGTAGAAAGCATTCAAGCGTAGACGAAGAAGCTGAGATTGATATGACCCCGATGCTCGACA
TCGTGTTCATCATGCTTATC

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NB System Transport; NB System Biopolymer Transport Component; MotA/lQ/ExbB Proton Channel Family Protein; LQ Protein; Transporter MotA/lQ/ExbB Proton Channel Family; Outer Membrane Transport Energization Protein ExbB; Biopolymer Transport ExbB Protein; L Protein; NB System Transport Protein ExbB; Biopolymer Transport; MotA/lQ/ExbB Proton Channel Family Domain Protein; Biopolymer Transport Protein lR; Biopolymer Transport Protein ExbB-Like

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAAGGDVLWLVAAVLFAMWVLMLERYWYLNWVSPKAHKAIITAWEAREDSTSWYAHRIREAWVSQAKQDLTARMLLIKTL
VAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLKDSMPHH

Sequences:

>Translated_160_residues
MAAGGDVLWLVAAVLFAMWVLMLERYWYLNWVSPKAHKAIITAWEAREDSTSWYAHRIREAWVSQAKQDLTARMLLIKTL
VAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLKDSMPHH
>Mature_159_residues
AAGGDVLWLVAAVLFAMWVLMLERYWYLNWVSPKAHKAIITAWEAREDSTSWYAHRIREAWVSQAKQDLTARMLLIKTLV
AICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISMATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLKDSMPHH

Specific function: Unknown

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17661; Mature: 17530

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
9.4 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
8.8 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGGDVLWLVAAVLFAMWVLMLERYWYLNWVSPKAHKAIITAWEAREDSTSWYAHRIRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
AWVSQAKQDLTARMLLIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHH
ATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLKDSMPHH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAGGDVLWLVAAVLFAMWVLMLERYWYLNWVSPKAHKAIITAWEAREDSTSWYAHRIRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
AWVSQAKQDLTARMLLIKTLVAICPMIGLLGTVTGMISVFDVMAVHGTSNARMMAAGISM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHH
ATMPTMAGMVAALSGVFFSTRLDAKMKISLAKLKDSMPHH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA