Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624636

Identifier: 167624636

GI number: 167624636

Start: 3295970

End: 3297802

Strand: Reverse

Name: 167624636

Synonym: Shal_2718

Alternate gene names: NA

Gene position: 3297802-3295970 (Counterclockwise)

Preceding gene: 167624638

Following gene: 167624635

Centisome position: 63.09

GC content: 44.95

Gene sequence:

>1833_bases
ATGAGGAAGGCGGTACTGGCGTTGTCTATTGGCGCGATTTTAGGGTTAGCAGGCTGTGGTGAAAATGATAATAAGCAAAT
CCAGCAAGCAGAGAAAACTGCGCAACCTACAGCTGAACAATCCGCTCAAATGCAATCTGCAGAGCAAGTCTATCTGTTGT
TAGTGGATAATTACTTTAAGGATTTATTGCAGCTGGAGCCTATTTACGCCACATTTGTTGGCGTTAATGACTACAACGAT
CAATTTGGCGATGGTTTATCTGATGCATACTTAAAGCAGCGTCACGATCTCAACACGCGCTATTTAAAAGAGGTCAAAAA
AATAGATCGTAGTCAGCTATCAAACGAGTTAAAGCTCAGCTATGACATGTTTAACTATGATCGTAATGTCGCCTTAGCGG
ATGAGACATTCCCTAATCACTTTATGCCAATGAACCAGTTTTATAGCACTGTGATTAGCATGGTGCAACTTGGCAGTGGT
GAAAGCGCCCAACCATTTAACACTGTTGAAGATTACCGTAACTGGGAGAAACGTCTACAAGGCTTTATTGAGTGGCTTAA
GCTCGCACAAGTTCGTATGGATGAAGGTGTCCAGAGCAAAGTGGTACTGCCGCGTGTGCTTGTTGAACGTATTATTCCTC
AGTTAAGTGCTCAGCTTGTCGATAACATTAGCGACAGCTTGTTCTATACCCCGATCACCTTGATGCCTGAGTCATTCTCA
GATGCAGACAAACAAGCGCTGACTCAAGAGTATACGGCGTTAATTGGTGAGCAGCTGCTGCCAGAGCTGACATCGCTTCG
CGATTACTTTCAAAATACTTACCTGAAGTCATCCCGTGCAACTGATGGTTGGTGGGGGCTACCAAACGGTAAAGTTTGGT
ACCAGCATCTTGCTAATTCGCACACTACAACGACCATGCCTGTCGATGAAATCCATAAAATTGGCCTAGATGAAGTTGCC
CGTATTTTATCTGAAATGGACAAAGTTCGAGTTCAAGTTGGTTTTGAAGGCGACCTAAGTGACTTTTTCGCATCATTGTC
ATCAGAGCCACAGTACTTCTTTACAGACCGCCAAGGCTTAATTGATGGCTACATGGTTCTTAAAGATAAAATCAATCTAG
AGTTACCTAAGTACTTCAATGTCATGCCAAAAGCCGATTATGTGGTTAAGCCTGTAGAAAGCTTTAGAGAGCAATCGGCA
GCAGGTGCCTCATACGATGCTCCAGCGGTTGATGGCTCTCGTCCGGGGGTATTCTATATTAATACCTATAACCTTAAGGC
ACAGCCAAAGTGGGGCATGACGACGCTGTCTCTGCACGAGGCTGCGCCAGGTCATCACTTCCAAATCGCGATTAAGCAAG
AGCTATCTGGTGTGCCTGAGTTCCAACGCTTTGGAAACTACACTGCATTTGAAGAGGGCTGGGCACTATACGCTGAGTAC
TTAGGCATTGAGATGGGCCTATTTAACGACCCATATCAATACTTTGGTAAGCTCTCAGATGAGATGCTGCGTGCTATGCG
CTTAGTGGTCGATACGGGTCTTCATGCTAAAGGTTGGACTCGTGAGCAAGCGATTCAGTATATGAAAGACAATTCGCCAA
TGGCGGAATCTGACATTATCGCAGAAGTTGAGCGTTATATGGCGATTCCTGGCCAAGCATTGAGCTACAAAGTAGGCCAG
TTAAAGATTTTGTCGCTGCGTGCACAAGCGGAAAAAGAGCTGGGCGAACAGTTTGATTTAAAAGCGTATCACGACCAAAT
CCTCACTTCAGGCTCGTTGCCGATGGAAGTGATGGAGTTAAAAGTGAACGATTGGATAGCTGCGCAAAAGTAA

Upstream 100 bases:

>100_bases
AGAATTACTGAATGAATAAATCATTAAAAGCTCCTTATGTGCTTCTGGTTTAAGTATAGAAAAGATAGAACATAGAACGA
TAAATAAAAGGAATAATAAA

Downstream 100 bases:

>100_bases
GCGAGCTAATCAGTAAAAACCCAGTTGGGATGTACCGTATTTCCAAGTCGTTTGGCTATAAATAATGGTATATACTGGCT
GGGTTTATTTTTGCCTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MRKAVLALSIGAILGLAGCGENDNKQIQQAEKTAQPTAEQSAQMQSAEQVYLLLVDNYFKDLLQLEPIYATFVGVNDYND
QFGDGLSDAYLKQRHDLNTRYLKEVKKIDRSQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG
ESAQPFNTVEDYRNWEKRLQGFIEWLKLAQVRMDEGVQSKVVLPRVLVERIIPQLSAQLVDNISDSLFYTPITLMPESFS
DADKQALTQEYTALIGEQLLPELTSLRDYFQNTYLKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKIGLDEVA
RILSEMDKVRVQVGFEGDLSDFFASLSSEPQYFFTDRQGLIDGYMVLKDKINLELPKYFNVMPKADYVVKPVESFREQSA
AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELSGVPEFQRFGNYTAFEEGWALYAEY
LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILSLRAQAEKELGEQFDLKAYHDQILTSGSLPMEVMELKVNDWIAAQK

Sequences:

>Translated_610_residues
MRKAVLALSIGAILGLAGCGENDNKQIQQAEKTAQPTAEQSAQMQSAEQVYLLLVDNYFKDLLQLEPIYATFVGVNDYND
QFGDGLSDAYLKQRHDLNTRYLKEVKKIDRSQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG
ESAQPFNTVEDYRNWEKRLQGFIEWLKLAQVRMDEGVQSKVVLPRVLVERIIPQLSAQLVDNISDSLFYTPITLMPESFS
DADKQALTQEYTALIGEQLLPELTSLRDYFQNTYLKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKIGLDEVA
RILSEMDKVRVQVGFEGDLSDFFASLSSEPQYFFTDRQGLIDGYMVLKDKINLELPKYFNVMPKADYVVKPVESFREQSA
AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELSGVPEFQRFGNYTAFEEGWALYAEY
LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILSLRAQAEKELGEQFDLKAYHDQILTSGSLPMEVMELKVNDWIAAQK
>Mature_610_residues
MRKAVLALSIGAILGLAGCGENDNKQIQQAEKTAQPTAEQSAQMQSAEQVYLLLVDNYFKDLLQLEPIYATFVGVNDYND
QFGDGLSDAYLKQRHDLNTRYLKEVKKIDRSQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG
ESAQPFNTVEDYRNWEKRLQGFIEWLKLAQVRMDEGVQSKVVLPRVLVERIIPQLSAQLVDNISDSLFYTPITLMPESFS
DADKQALTQEYTALIGEQLLPELTSLRDYFQNTYLKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKIGLDEVA
RILSEMDKVRVQVGFEGDLSDFFASLSSEPQYFFTDRQGLIDGYMVLKDKINLELPKYFNVMPKADYVVKPVESFREQSA
AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELSGVPEFQRFGNYTAFEEGWALYAEY
LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ
LKILSLRAQAEKELGEQFDLKAYHDQILTSGSLPMEVMELKVNDWIAAQK

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69348; Mature: 69348

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAVLALSIGAILGLAGCGENDNKQIQQAEKTAQPTAEQSAQMQSAEQVYLLLVDNYFK
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHH
DLLQLEPIYATFVGVNDYNDQFGDGLSDAYLKQRHDLNTRYLKEVKKIDRSQLSNELKLS
HHHHCCCHHEEEEECCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHEEE
YDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSGESAQPFNTVEDYRNWEKRLQ
EHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
GFIEWLKLAQVRMDEGVQSKVVLPRVLVERIIPQLSAQLVDNISDSLFYTPITLMPESFS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCEECCCCCC
DADKQALTQEYTALIGEQLLPELTSLRDYFQNTYLKSSRATDGWWGLPNGKVWYQHLANS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
HTTTTMPVDEIHKIGLDEVARILSEMDKVRVQVGFEGDLSDFFASLSSEPQYFFTDRQGL
CCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCEEECCCCCC
IDGYMVLKDKINLELPKYFNVMPKADYVVKPVESFREQSAAGASYDAPAVDGSRPGVFYI
HHHHHEEECCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELSGVPEFQRFGNYTAFEEGWALYAEY
EEEEEEECCCCCCEEEEECCCCCCCEEEEEEHHHHCCCCHHHHCCCCCCHHHHHHHHHHH
LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDII
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
AEVERYMAIPGQALSYKVGQLKILSLRAQAEKELGEQFDLKAYHDQILTSGSLPMEVMEL
HHHHHHHCCCCCHHEEECCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHE
KVNDWIAAQK
EHHHHHCCCC
>Mature Secondary Structure
MRKAVLALSIGAILGLAGCGENDNKQIQQAEKTAQPTAEQSAQMQSAEQVYLLLVDNYFK
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHH
DLLQLEPIYATFVGVNDYNDQFGDGLSDAYLKQRHDLNTRYLKEVKKIDRSQLSNELKLS
HHHHCCCHHEEEEECCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHEEE
YDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSGESAQPFNTVEDYRNWEKRLQ
EHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
GFIEWLKLAQVRMDEGVQSKVVLPRVLVERIIPQLSAQLVDNISDSLFYTPITLMPESFS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCEECCCCCC
DADKQALTQEYTALIGEQLLPELTSLRDYFQNTYLKSSRATDGWWGLPNGKVWYQHLANS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
HTTTTMPVDEIHKIGLDEVARILSEMDKVRVQVGFEGDLSDFFASLSSEPQYFFTDRQGL
CCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCEEECCCCCC
IDGYMVLKDKINLELPKYFNVMPKADYVVKPVESFREQSAAGASYDAPAVDGSRPGVFYI
HHHHHEEECCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELSGVPEFQRFGNYTAFEEGWALYAEY
EEEEEEECCCCCCEEEEECCCCCCCEEEEEEHHHHCCCCHHHHCCCCCCHHHHHHHHHHH
LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDII
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
AEVERYMAIPGQALSYKVGQLKILSLRAQAEKELGEQFDLKAYHDQILTSGSLPMEVMEL
HHHHHHHCCCCCHHEEECCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHE
KVNDWIAAQK
EHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA