Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is bla [H]

Identifier: 167624628

GI number: 167624628

Start: 3289469

End: 3290326

Strand: Reverse

Name: bla [H]

Synonym: Shal_2710

Alternate gene names: 167624628

Gene position: 3290326-3289469 (Counterclockwise)

Preceding gene: 167624629

Following gene: 167624625

Centisome position: 62.95

GC content: 43.94

Gene sequence:

>858_bases
ATGAGTGTGCTTAAACCTAGCGATATAAAGACAAATAACAATACGGGATATTGGGCACGTCTTTTTCTTCCGCTAGCGGT
TTTTATTACCACACCTTTTCAGGTGTCGGCAGCACTTGAGGAACGTTCTGATTGGCAGCAATATTTTAATCACTACGATG
CCAAGGGGACGATAGTGGTGCGCGATGAGCGCGGCCCTAAAGCCAAGCTCTGGGTTGTTGATAGTGAGCGTGCCCAGCAG
AGGTTTTCACCTGCATCGACCTATAAAATTCCACACACGCTATTTGCTTTGGATGCCAAGCTGGTTAAAGATGAGTTTCA
GACGTTCAAATGGGATGGGGTCAAAAGAAGTTTCACGCTGCACAATCAAGATCAGAACCTGCGCTCAGCCATGCGATACT
CTGCAGTGTGGGTTTATGACGAATTTGCAAAACAACTTGGCGAACCAAAAGCCCAGCAATACTTGTCGCTAATTGATTAC
GGTAATGCCGACTCGAGCTTTGATAAAGTAATCGAAGACAGTGACAGTTACTGGATTGATGGCAAGTTGACTATCTCAGC
CACAGAACAAGTGGAATTTCTACAGGCTTTATATCGAAACGAATTACCTTTTGATTTAGCTGACCAGTTATTAGTTAAAG
ATATTATGATTGTTGAAGCGGGTAAAGATTGGATTTTACGGGCGAAAACAGGCTGGCAAGGGCAATATGGCTGGTGGGTT
GGTTGGGTAGAGTGGCCAGTAGGCCCAGTATTTTTTGCTTTAAATATCGATACACCAAATAGGATGAAAGATCTTTATAA
ACGAGAGACCATCACACGGGAGATCTTACAGTCTATTGAGGCGCTACCTGCTAAGTAA

Upstream 100 bases:

>100_bases
AGTGGTGGTGATGTCGATTGTCATGAGCGTTAAGTTGTTATCGGCGCAGTACGATCTATTTGCGTGGCTATAAATACTAT
TTTTAAGGATGACCTTTTTG

Downstream 100 bases:

>100_bases
TAACTAGCGGTCCTCAGTTAGTCGCTAGTCGCCAAAAGAGGTTTAATACTTCAGTTAAACAATCAATTCGCCAAGATACC
CGATTTATGATTTCAGTTCC

Product: beta-lactamase

Products: NA

Alternate protein names: Penicillinase [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSVLKPSDIKTNNNTGYWARLFLPLAVFITTPFQVSAALEERSDWQQYFNHYDAKGTIVVRDERGPKAKLWVVDSERAQQ
RFSPASTYKIPHTLFALDAKLVKDEFQTFKWDGVKRSFTLHNQDQNLRSAMRYSAVWVYDEFAKQLGEPKAQQYLSLIDY
GNADSSFDKVIEDSDSYWIDGKLTISATEQVEFLQALYRNELPFDLADQLLVKDIMIVEAGKDWILRAKTGWQGQYGWWV
GWVEWPVGPVFFALNIDTPNRMKDLYKRETITREILQSIEALPAK

Sequences:

>Translated_285_residues
MSVLKPSDIKTNNNTGYWARLFLPLAVFITTPFQVSAALEERSDWQQYFNHYDAKGTIVVRDERGPKAKLWVVDSERAQQ
RFSPASTYKIPHTLFALDAKLVKDEFQTFKWDGVKRSFTLHNQDQNLRSAMRYSAVWVYDEFAKQLGEPKAQQYLSLIDY
GNADSSFDKVIEDSDSYWIDGKLTISATEQVEFLQALYRNELPFDLADQLLVKDIMIVEAGKDWILRAKTGWQGQYGWWV
GWVEWPVGPVFFALNIDTPNRMKDLYKRETITREILQSIEALPAK
>Mature_284_residues
SVLKPSDIKTNNNTGYWARLFLPLAVFITTPFQVSAALEERSDWQQYFNHYDAKGTIVVRDERGPKAKLWVVDSERAQQR
FSPASTYKIPHTLFALDAKLVKDEFQTFKWDGVKRSFTLHNQDQNLRSAMRYSAVWVYDEFAKQLGEPKAQQYLSLIDYG
NADSSFDKVIEDSDSYWIDGKLTISATEQVEFLQALYRNELPFDLADQLLVKDIMIVEAGKDWILRAKTGWQGQYGWWVG
WVEWPVGPVFFALNIDTPNRMKDLYKRETITREILQSIEALPAK

Specific function: This is an oxacillin-hydrolyzing beta-lactamase [H]

COG id: COG2602

COG function: function code V; Beta-lactamase class D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-D beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR002137
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00905 Transpeptidase [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 33084; Mature: 32953

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLKPSDIKTNNNTGYWARLFLPLAVFITTPFQVSAALEERSDWQQYFNHYDAKGTIVV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RDERGPKAKLWVVDSERAQQRFSPASTYKIPHTLFALDAKLVKDEFQTFKWDGVKRSFTL
ECCCCCCEEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEE
HNQDQNLRSAMRYSAVWVYDEFAKQLGEPKAQQYLSLIDYGNADSSFDKVIEDSDSYWID
CCCCHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEC
GKLTISATEQVEFLQALYRNELPFDLADQLLVKDIMIVEAGKDWILRAKTGWQGQYGWWV
CEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCEEE
GWVEWPVGPVFFALNIDTPNRMKDLYKRETITREILQSIEALPAK
EEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVLKPSDIKTNNNTGYWARLFLPLAVFITTPFQVSAALEERSDWQQYFNHYDAKGTIVV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
RDERGPKAKLWVVDSERAQQRFSPASTYKIPHTLFALDAKLVKDEFQTFKWDGVKRSFTL
ECCCCCCEEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEE
HNQDQNLRSAMRYSAVWVYDEFAKQLGEPKAQQYLSLIDYGNADSSFDKVIEDSDSYWID
CCCCHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEC
GKLTISATEQVEFLQALYRNELPFDLADQLLVKDIMIVEAGKDWILRAKTGWQGQYGWWV
CEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCEEE
GWVEWPVGPVFFALNIDTPNRMKDLYKRETITREILQSIEALPAK
EEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9687410 [H]