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The map label for this gene is oruR [H]

Identifier: 167624530

GI number: 167624530

Start: 3166590

End: 3167633

Strand: Reverse

Name: oruR [H]

Synonym: Shal_2609

Alternate gene names: 167624530

Gene position: 3167633-3166590 (Counterclockwise)

Preceding gene: 167624533

Following gene: 167624525

Centisome position: 60.6

GC content: 43.58

Gene sequence:

>1044_bases
ATGCATCAGGCCTGTAGCTATAAACCACATATTCGGGTAGGGGATCAGTCTTATCCTGCTTATGAATTAAAGAATCTGTT
TCGCTATCTCAAGTTGCACTTTGCGAGTGAGGTTGTCGAACGACTCTATACTGACATAGGAATTGGCGAGGCGGAGCTAG
CGCTCAGTCAATTTGTTTATGTGTGGCAGGTTGAATATGCAATGAACTATCTTCGTGAACTCAGTCCGGATCCAGAAACC
GCCGTCAAAGTTGCATCCAGTTATAGGGTTGCCACATTAGATGTGTTGCTGCCTCATTTAACCCAATTTAAGACCTTGGG
ACAATGCCTACAGTTTGCAATTTCAAATCCTGACCTTGTCGGCAGTTTTTCCGATACTTTACTGCGTAATCATGATGGCC
ATTTACATGTGAGATGGCTAAATACCAATAAAGTCGATACCGAACACTATAGTTTCCAATTTCAGCATAGCCTTTGCTCC
TTGCTGGCAGTGGCTAAAGAGTTAACGGGGGAGGCTGTCCAAGTGTCTCATATCTCTTTCGCTGAGCCAGCAAGAGCGGT
TGACTTATTATCGGTACAGTCTGGAGCCGATATTAGGTTTAATAGTGAGTTCTTCGAGTGGTCGATTGATCATCGTTATC
TATCGCTGCCAGTGACTTACTCTTTTGAGCAAGATGTTGCTGGCTGCAGCATTGTCAGTTCACATTCCTATATATCAGAG
ATTTTAACGATATTAAGGCAGCAAGCACCAGAGCTTGCTTGCATGGAATCGATGGCAGAGTTACAGAATATCAGCGCTAG
AACACTAAGACGAAAATTAGCTAACGCCAATACCAGTTATCAAAAGCTGGTGGATCAGGTTCGCTGCCAAAAGGCCATTG
ACTTGATCTTAACCAGTAACTATTCGATAGATGAGATCTCAGAGCTAATGGGCTTTAGTGATGTTAGTCATTTCAGGCAA
AGCTTTAAGCATTGGATTGGCTATCCTCCTGGCCACTTTCACCTTTTAAATCGCCCACTTACTGAGAGTCTTGCTAGCAA
GTAG

Upstream 100 bases:

>100_bases
TTAACAAGGATGTTTTTTAAGCTTAATTTAATAAAAGGCTGTTAATTCAGATTTAGATCCGTTAAAAATATTGATACAGA
TCAACTTATCGAAGAGCTCA

Downstream 100 bases:

>100_bases
GCGAGTGGTAATATTAAGTTAACCACTGATCCGTTCTAATGCTGACAGTTTCCAAGTTCAGGTGCCATCTCATCTATCCA
TTGCTCTATGAGGGCTACAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MHQACSYKPHIRVGDQSYPAYELKNLFRYLKLHFASEVVERLYTDIGIGEAELALSQFVYVWQVEYAMNYLRELSPDPET
AVKVASSYRVATLDVLLPHLTQFKTLGQCLQFAISNPDLVGSFSDTLLRNHDGHLHVRWLNTNKVDTEHYSFQFQHSLCS
LLAVAKELTGEAVQVSHISFAEPARAVDLLSVQSGADIRFNSEFFEWSIDHRYLSLPVTYSFEQDVAGCSIVSSHSYISE
ILTILRQQAPELACMESMAELQNISARTLRRKLANANTSYQKLVDQVRCQKAIDLILTSNYSIDEISELMGFSDVSHFRQ
SFKHWIGYPPGHFHLLNRPLTESLASK

Sequences:

>Translated_347_residues
MHQACSYKPHIRVGDQSYPAYELKNLFRYLKLHFASEVVERLYTDIGIGEAELALSQFVYVWQVEYAMNYLRELSPDPET
AVKVASSYRVATLDVLLPHLTQFKTLGQCLQFAISNPDLVGSFSDTLLRNHDGHLHVRWLNTNKVDTEHYSFQFQHSLCS
LLAVAKELTGEAVQVSHISFAEPARAVDLLSVQSGADIRFNSEFFEWSIDHRYLSLPVTYSFEQDVAGCSIVSSHSYISE
ILTILRQQAPELACMESMAELQNISARTLRRKLANANTSYQKLVDQVRCQKAIDLILTSNYSIDEISELMGFSDVSHFRQ
SFKHWIGYPPGHFHLLNRPLTESLASK
>Mature_347_residues
MHQACSYKPHIRVGDQSYPAYELKNLFRYLKLHFASEVVERLYTDIGIGEAELALSQFVYVWQVEYAMNYLRELSPDPET
AVKVASSYRVATLDVLLPHLTQFKTLGQCLQFAISNPDLVGSFSDTLLRNHDGHLHVRWLNTNKVDTEHYSFQFQHSLCS
LLAVAKELTGEAVQVSHISFAEPARAVDLLSVQSGADIRFNSEFFEWSIDHRYLSLPVTYSFEQDVAGCSIVSSHSYISE
ILTILRQQAPELACMESMAELQNISARTLRRKLANANTSYQKLVDQVRCQKAIDLILTSNYSIDEISELMGFSDVSHFRQ
SFKHWIGYPPGHFHLLNRPLTESLASK

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39516; Mature: 39516

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQACSYKPHIRVGDQSYPAYELKNLFRYLKLHFASEVVERLYTDIGIGEAELALSQFVY
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VWQVEYAMNYLRELSPDPETAVKVASSYRVATLDVLLPHLTQFKTLGQCLQFAISNPDLV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GSFSDTLLRNHDGHLHVRWLNTNKVDTEHYSFQFQHSLCSLLAVAKELTGEAVQVSHISF
CCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
AEPARAVDLLSVQSGADIRFNSEFFEWSIDHRYLSLPVTYSFEQDVAGCSIVSSHSYISE
CCCHHHHHHHEECCCCCEEECCHHHEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
ILTILRQQAPELACMESMAELQNISARTLRRKLANANTSYQKLVDQVRCQKAIDLILTSN
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
YSIDEISELMGFSDVSHFRQSFKHWIGYPPGHFHLLNRPLTESLASK
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHCCC
>Mature Secondary Structure
MHQACSYKPHIRVGDQSYPAYELKNLFRYLKLHFASEVVERLYTDIGIGEAELALSQFVY
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VWQVEYAMNYLRELSPDPETAVKVASSYRVATLDVLLPHLTQFKTLGQCLQFAISNPDLV
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GSFSDTLLRNHDGHLHVRWLNTNKVDTEHYSFQFQHSLCSLLAVAKELTGEAVQVSHISF
CCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
AEPARAVDLLSVQSGADIRFNSEFFEWSIDHRYLSLPVTYSFEQDVAGCSIVSSHSYISE
CCCHHHHHHHEECCCCCEEECCHHHEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
ILTILRQQAPELACMESMAELQNISARTLRRKLANANTSYQKLVDQVRCQKAIDLILTSN
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
YSIDEISELMGFSDVSHFRQSFKHWIGYPPGHFHLLNRPLTESLASK
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]