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The map label for this gene is yhhT [H]

Identifier: 167624521

GI number: 167624521

Start: 3154462

End: 3155613

Strand: Reverse

Name: yhhT [H]

Synonym: Shal_2600

Alternate gene names: 167624521

Gene position: 3155613-3154462 (Counterclockwise)

Preceding gene: 167624524

Following gene: 167624520

Centisome position: 60.37

GC content: 46.09

Gene sequence:

>1152_bases
ATGAGACGATTTGAGAATCAAGGCGTAGCATTTAAAGGCTTTGCTATTTCGGCGTTTATCATTGTTATTTTAGCGGGCAT
TAAGGCGGCGAGCCCGATTGTCGTGCCTTTTGTGCTGTCGGTATTTATCGCCGTGATCTGTAATCCGATGATTAGCTGGA
TGACCCGTCATCGTGCACCACGTGGTTTAGCTGTGCTGCTGTTGATGGTCTTTATCGTGATGATGGGACTATGGTTAGCC
TCGGTGGTTGGCACCTCGATTAATGAGTTCTCTAAACAGTTGCCATTTTATCGCGACCAGTTGATCGAGCAGTTCTCATG
GGTTGTTGAGAAGCTCGCCGCGTTTAATATTCAGATCTCTAAAGAGCAGATCTTGGCCTACTTCGACCCTGGTGTGGCAC
TGTCGATGACCACGAATATGTTGTCAGGCGTGGGGAGCGTGATGGCGAACCTGTTCTTAATCATCTTGACCGTGGTGTTT
ATGTTGTTTGAGTCCAATGGTTTTTCGACCAAGATGCATTTAGCGTTAGATGATCCTGATATGCGCTTAAAGCAGGTAGA
CCGTTTCTTGAATTCGGTAAACCAATATATGGTGATCAAGACACTCGTCAGCTTAGGTACTGGCTTGATTATCGGTGTAG
GTTTGTACTTTATCGGCGTAGATTATGCCTTGTTATGGGGTGTTATCGCATTCCTGTTTAACTATATTCCAAATATCGGT
TCGATTATTGCGGCCATCCCCTCTGTACTACTGGCGTTTATTCAATTAGGCCCTGGCGCCGCTGGTGGAGTCGCACTGCT
GTATTTAGGCACAAATACAATTATGGGGAATGCCATTGAGCCTAGATATATGGGCAAAGGCTTAGGTTTATCGACCTTAG
TGGTGTTTTTATCGTTAATCTTCTGGGGCTGGTTGTTAGGCTCTGTGGGGATGTTGCTATCGGTGCCACTAACCATGATC
GTGAAGATAGCCCTAGAGTCTAGCTCTGGTGGTCGTTGGCTAGCTGTTTTGCTTGGGGATGATGTCTCTGAAGAGCAGCT
GCAAGTGGCTAAATCAGCCGCCTCTGCTCAGGAAGAAAGCGCTGAGTTAGAAAACTCTCAGATAGAGAACTCTCCGTTAG
AGAGTTCAGAGTTAAAGAATAGAGAAAAGTGA

Upstream 100 bases:

>100_bases
ATTTCTGGTTTCATAAATAACGATGTCCTTATAGTGTATGTTAGAAGCAGTTTATATAACCCTATCAATATTATAGTGAA
TCAAGAAGGATTTTATTGTA

Downstream 100 bases:

>100_bases
GTTTGATGCAGTTATTTATTGAAGCAGTAAAGCAAATAGAGTTATCAGAAGATGTCGGACGGCTATTTCATGGTCGAGGA
GGGCGTTTTCAAGGCTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRRFENQGVAFKGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPRGLAVLLLMVFIVMMGLWLA
SVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQISKEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVF
MLFESNGFSTKMHLALDDPDMRLKQVDRFLNSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIAFLFNYIPNIG
SIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMI
VKIALESSSGGRWLAVLLGDDVSEEQLQVAKSAASAQEESAELENSQIENSPLESSELKNREK

Sequences:

>Translated_383_residues
MRRFENQGVAFKGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPRGLAVLLLMVFIVMMGLWLA
SVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQISKEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVF
MLFESNGFSTKMHLALDDPDMRLKQVDRFLNSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIAFLFNYIPNIG
SIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMI
VKIALESSSGGRWLAVLLGDDVSEEQLQVAKSAASAQEESAELENSQIENSPLESSELKNREK
>Mature_383_residues
MRRFENQGVAFKGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPRGLAVLLLMVFIVMMGLWLA
SVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQISKEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVF
MLFESNGFSTKMHLALDDPDMRLKQVDRFLNSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIAFLFNYIPNIG
SIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMI
VKIALESSSGGRWLAVLLGDDVSEEQLQVAKSAASAQEESAELENSQIENSPLESSELKNREK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=330, Percent_Identity=41.2121212121212, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI1787885, Length=321, Percent_Identity=46.417445482866, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1788838, Length=351, Percent_Identity=23.6467236467236, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41719; Mature: 41719

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFENQGVAFKGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGLAVLLLMVFIVMMGLWLASVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQIS
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEC
KEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESNGFSTKMHLALDDPD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
MRLKQVDRFLNSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIAFLFNYIPNIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGLSTLVVFLSLI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCHHHCCCCCHHHHHHHHHHH
FWGWLLGSVGMLLSVPLTMIVKIALESSSGGRWLAVLLGDDVSEEQLQVAKSAASAQEES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AELENSQIENSPLESSELKNREK
HHHHHHHCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MRRFENQGVAFKGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGLAVLLLMVFIVMMGLWLASVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQIS
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEC
KEQILAYFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESNGFSTKMHLALDDPD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
MRLKQVDRFLNSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIAFLFNYIPNIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGLSTLVVFLSLI
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCHHHCCCCCHHHHHHHHHHH
FWGWLLGSVGMLLSVPLTMIVKIALESSSGGRWLAVLLGDDVSEEQLQVAKSAASAQEES
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AELENSQIENSPLESSELKNREK
HHHHHHHCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]