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The map label for this gene is dadA [H]

Identifier: 167624474

GI number: 167624474

Start: 3091195

End: 3092460

Strand: Reverse

Name: dadA [H]

Synonym: Shal_2553

Alternate gene names: 167624474

Gene position: 3092460-3091195 (Counterclockwise)

Preceding gene: 167624475

Following gene: 167624471

Centisome position: 59.16

GC content: 49.45

Gene sequence:

>1266_bases
ATGAGCAATAATAGGCATCCTGACACATTGACCATTGTTGGCGCAGGTATTGTGGGATTAGCGGCGGCGATAGAGCTGCA
GCGAGCGGGATTTAATGTCACGGTTGTGGATAGAGAGGGCGCGGGTGCGGGAGCTTCAAAGGGCAACGCTGGTCACTTTG
CCACCGAGCAGGTATTTCCTTTAGCGGATCCTGCCATGTTACCCAAGCTGCCAGGTATGCTGCTGGATCCGCTTGGGCCG
TTTCGTATTCAACCTCAGTACTTTTTAAAGGCGCTACCTTGGTTTTTGCGTTTCCTACACAATATGTTGCCTTCACGTAG
AGCCAATAATAGTCGAGCGATTAAAGCGCTTAATCAAGGCTCTATCGCGGCGATAAAGTCCCTTGCTGAGTTTTGTGGCT
GTGAAGAGTTACTGACCTTTAACGGCAGCTTGCTGGTATTTGAAGGCACATCGCAGCAGGAAGTACACAAAGAGTTTCGT
GCTTATGCCGAAGCGGGAGTCGAAGTTCAGTTATTGAGTGGCGATGAAGTCAGGGGACTAGAGCCTTCGTTGAGTGTTAA
TATCACCAATGCGTTGTACTTTACCCATGTGGGTCACACTGAAGATCCCTATCGTTTATGTTTGGCTCTAGAAGCTAAAT
TTAAACAGATGGGGGGAGAGGTGGTCACCGAAGAGTTAGTGAAGATCAGTAGCTCCAATACAGATTCGAATATCAGGTTA
GAAACAAATTTTGGGAGCCATACCACCGAACGGCTGATTATTGCCTCAGGCGCCTGGTCTAAGCCTTTTGCTAAGCAGCT
AGGCTATTCGGTGCCTTTGGAAACAGAGCGGGGTTATCACTTGATGATGCCGCAGCGCAGCTGCTTGTCTCGTCCGGTAG
CCTCTTATAATCGTAAGTTCATCATCACCCCGATGCAGGGTGGCACAAGGTTAGCCGGTACGGTTGAGTTTGGTGGTCTG
AAGGCGCCTTTAGTAGAGGCAAGAGCTAATTGCCTATTTCCTCATGCAAAGGCATTGCTGCCGGAGCTATTTGCTGACGC
ATCCGTTGAGGACGGTGAGCGTTGGATGGGCTTTAGGCCCTCTATGCCAGATAGCCTGCCAGTCTTGGGTCGAAGCCAGA
AGCAATCGAATGTGTTTTTCTCATTCGGTCACCAGCACCTGGGGCTCACTTGGTCGGCGATTACGGCTAAGTTATTGACG
CAAGAGGTATTAGGTAAGCAGGCTGATATTGACTTAAGCCCCTATCGAATAGATAGGTTTAGTTAG

Upstream 100 bases:

>100_bases
TATTACCGGCAAGCATCAGTTCTTTATCGACTCCGATGATGTGTTTCAAAACGGTTTTATGTTGCGTTAATTGCATCAGC
AAAATGAGTGGAGAAAAGTT

Downstream 100 bases:

>100_bases
AGTTAGCCTAACATTCAGCATATGAAAGTGGACTTTTTAAACGGAGTTATTAAGTGAATACGCTGCAGAAATTGATTGTT
ATTGAGAGCACCGTGTTGAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MSNNRHPDTLTIVGAGIVGLAAAIELQRAGFNVTVVDREGAGAGASKGNAGHFATEQVFPLADPAMLPKLPGMLLDPLGP
FRIQPQYFLKALPWFLRFLHNMLPSRRANNSRAIKALNQGSIAAIKSLAEFCGCEELLTFNGSLLVFEGTSQQEVHKEFR
AYAEAGVEVQLLSGDEVRGLEPSLSVNITNALYFTHVGHTEDPYRLCLALEAKFKQMGGEVVTEELVKISSSNTDSNIRL
ETNFGSHTTERLIIASGAWSKPFAKQLGYSVPLETERGYHLMMPQRSCLSRPVASYNRKFIITPMQGGTRLAGTVEFGGL
KAPLVEARANCLFPHAKALLPELFADASVEDGERWMGFRPSMPDSLPVLGRSQKQSNVFFSFGHQHLGLTWSAITAKLLT
QEVLGKQADIDLSPYRIDRFS

Sequences:

>Translated_421_residues
MSNNRHPDTLTIVGAGIVGLAAAIELQRAGFNVTVVDREGAGAGASKGNAGHFATEQVFPLADPAMLPKLPGMLLDPLGP
FRIQPQYFLKALPWFLRFLHNMLPSRRANNSRAIKALNQGSIAAIKSLAEFCGCEELLTFNGSLLVFEGTSQQEVHKEFR
AYAEAGVEVQLLSGDEVRGLEPSLSVNITNALYFTHVGHTEDPYRLCLALEAKFKQMGGEVVTEELVKISSSNTDSNIRL
ETNFGSHTTERLIIASGAWSKPFAKQLGYSVPLETERGYHLMMPQRSCLSRPVASYNRKFIITPMQGGTRLAGTVEFGGL
KAPLVEARANCLFPHAKALLPELFADASVEDGERWMGFRPSMPDSLPVLGRSQKQSNVFFSFGHQHLGLTWSAITAKLLT
QEVLGKQADIDLSPYRIDRFS
>Mature_420_residues
SNNRHPDTLTIVGAGIVGLAAAIELQRAGFNVTVVDREGAGAGASKGNAGHFATEQVFPLADPAMLPKLPGMLLDPLGPF
RIQPQYFLKALPWFLRFLHNMLPSRRANNSRAIKALNQGSIAAIKSLAEFCGCEELLTFNGSLLVFEGTSQQEVHKEFRA
YAEAGVEVQLLSGDEVRGLEPSLSVNITNALYFTHVGHTEDPYRLCLALEAKFKQMGGEVVTEELVKISSSNTDSNIRLE
TNFGSHTTERLIIASGAWSKPFAKQLGYSVPLETERGYHLMMPQRSCLSRPVASYNRKFIITPMQGGTRLAGTVEFGGLK
APLVEARANCLFPHAKALLPELFADASVEDGERWMGFRPSMPDSLPVLGRSQKQSNVFFSFGHQHLGLTWSAITAKLLTQ
EVLGKQADIDLSPYRIDRFS

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=434, Percent_Identity=25.3456221198157, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46105; Mature: 45974

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNRHPDTLTIVGAGIVGLAAAIELQRAGFNVTVVDREGAGAGASKGNAGHFATEQVFP
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
LADPAMLPKLPGMLLDPLGPFRIQPQYFLKALPWFLRFLHNMLPSRRANNSRAIKALNQG
CCCCHHHHCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
SIAAIKSLAEFCGCEELLTFNGSLLVFEGTSQQEVHKEFRAYAEAGVEVQLLSGDEVRGL
HHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
EPSLSVNITNALYFTHVGHTEDPYRLCLALEAKFKQMGGEVVTEELVKISSSNTDSNIRL
CCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEE
ETNFGSHTTERLIIASGAWSKPFAKQLGYSVPLETERGYHLMMPQRSCLSRPVASYNRKF
EECCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCHHHCCCEE
IITPMQGGTRLAGTVEFGGLKAPLVEARANCLFPHAKALLPELFADASVEDGERWMGFRP
EEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCC
SMPDSLPVLGRSQKQSNVFFSFGHQHLGLTWSAITAKLLTQEVLGKQADIDLSPYRIDRF
CCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure 
SNNRHPDTLTIVGAGIVGLAAAIELQRAGFNVTVVDREGAGAGASKGNAGHFATEQVFP
CCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
LADPAMLPKLPGMLLDPLGPFRIQPQYFLKALPWFLRFLHNMLPSRRANNSRAIKALNQG
CCCCHHHHCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
SIAAIKSLAEFCGCEELLTFNGSLLVFEGTSQQEVHKEFRAYAEAGVEVQLLSGDEVRGL
HHHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
EPSLSVNITNALYFTHVGHTEDPYRLCLALEAKFKQMGGEVVTEELVKISSSNTDSNIRL
CCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEE
ETNFGSHTTERLIIASGAWSKPFAKQLGYSVPLETERGYHLMMPQRSCLSRPVASYNRKF
EECCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCHHHCCCEE
IITPMQGGTRLAGTVEFGGLKAPLVEARANCLFPHAKALLPELFADASVEDGERWMGFRP
EEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCC
SMPDSLPVLGRSQKQSNVFFSFGHQHLGLTWSAITAKLLTQEVLGKQADIDLSPYRIDRF
CCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA