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The map label for this gene is 167624448

Identifier: 167624448

GI number: 167624448

Start: 3055072

End: 3057006

Strand: Reverse

Name: 167624448

Synonym: Shal_2526

Alternate gene names: NA

Gene position: 3057006-3055072 (Counterclockwise)

Preceding gene: 167624450

Following gene: 167624447

Centisome position: 58.49

GC content: 48.17

Gene sequence:

>1935_bases
ATGACCGTTCTTCTAATGACTCCACCAATGACCCAGCTGAATACGCCTTATCCGGCAACAGCGTATTTAACTGGTTTTTT
ACGCTCTCAAGGTTATGAGGCGGTGCAGCGAGATCCTGCTATTGAGCTTTTCCTAGAGATGATGACAGCGCCTGCGCTGG
AGGTTATTCGTCAGCATGTAGAAGAAAACTACGAGCATTTTGAAGACGATGAACTGCCTGATGTGATCTTTAATTTTCTG
GCTGAGTATGACCGCTACCATCTAGCCGTTGAACCCGCTATTCGCTTTTTACAGGGCAAAGATCCTAGTCTTGCACTGCG
TATTAACTCCCGGCGTTTTTTACCGGAAGGACCAGCGTTTGACACGATTGCGCAGATGGAAGCGGTGTCCGGCGATGTGT
TGCAAGCAGCCTTTGGCAATCTAGGTGTACAAGACAAAGCCAAATATCTCGCAACCTTGTTTATTAATGATCTGTCCAGC
GTCATTACTCAAGGGGTCGATCCTTACTTTGAGGTGAGCCGTTATGGCGAGAAGTTAGCGGCGGCCAACCCAAGCTTCGA
CAATCTTTACGACACCTTGATGGACGAGCCGAGTTTCAGCTCGGAAATTTTGGAACAATTAGTCGAGCAGTATCTGGAAG
AAACTCAGCCTAGCGTCGTCGCGTTAACCGTACCTTTTCCCGGCAATATGCTAGGCGCCTTACGTATTGCACAAACCTGT
AAGGCCATCAATCCTGAAATCCCCATAGTAATGGGCGGCGGCTTTATTAATACCGAGCTGCGCGCGCTGAAAGATCCTCG
AGTGTTTGAGTTTGTCGATTTTATCTGTCTGGACGACGGCGAACGTCCTTTTATCACGCTGCTGGAGTACTTTGAAGGGC
AGCGTGAGGTAGACGAGCTAGTGCGCACCTATTTTCTTGCTGAGGATGAAAATGGCGAGGCCTACGTACACTTTAATGAA
AATACAGAGCTGCACGATATCCCACAAACCGATGTCGGTGCGCCAGTGTACGACGGTCTGCCATTGGGTGAATATCTGTC
TTTGTGTGAAATGCTTAATCCGATGCACCGCATATGGAGCGACGGACGCTGGAATAAACTGACCATAGCCCATGGCTGTT
ACTGGCGTAAATGCAGTTTTTGCGATGTCAGTCTGGACTATATCGGCCGTTTTGATGCCACAGAAGCCGATGTTTTAGTG
GATAGAATCGAGCAACTTATCGAAGAAACCGGCGAGACGGGGTTTCACTTTGTCGATGAAGCCTTACCGCCAAAGCTTTT
GTTTGCACTAGCCAAACGCCTCATTGAACGCAAGGTTGTGATCAGCTGGTGGGGCAATATCCGTTTTGAAAGGACATTTA
GTCAAGCACGTTGTCAGTTGCTGGCAGAGTCCGGTTGTATCGCTGTTAGCGGTGGCCTTGAGGTGGCGTCAGACCGTCTT
TTGAAACTGATGAAAAAAGGCGTGAGTGTTGAGCGGGTCGCCCAAGTAACCAAAGCCTTCAGTGATGCAGGTATACTGGT
TCACGCCTATTTAATGTATGGTTTTCCAACTCAAACCGAGCAAGAAACGGTTGATTCATTAGAGATGGTGCGTCAGATGA
TGCAGCAAGGTTGTTTCCAGTCTGCCTACTGGCACCGTTTTGTGGCCACAGTTCACAGTCCTGTTGGCATCAACCCAGAG
AAGTTTGGCATCACGCTTACTGAGCGCCCTGAGATCTTATTTGCTGAAAACGATGTGGACTTCATCGATCCAACCGGTAC
GGATCATGAGATGCTTGGCGAGGGGCTGCGAAAGGCTATCTACAACTATATGCATGGTATTGGTTTTGAGCAGCCGATGA
GTTTCTGGTTTAACCAGAGCGTTGTGCGAACTCAGATGAAAAAAGATCTAGTCTCAAAAGCGATTAACAACCTAATCGAT
AGCTGTGAAGAATAG

Upstream 100 bases:

>100_bases
TTCACGGATGGCTTTTCACTGTTCAGTTTTTGCACTGATATGGTTTTGCACCGTTCAGCTTTATACAGAGTATTTAGGTT
TTACTATTTAAAGGCAGGCT

Downstream 100 bases:

>100_bases
AAGTGGTTCTAAGTGTTTGCGGCATGCGTATATGTAGATACGCAGACCGCATCTACTCACCACGGCGAAGCCATGCGCTA
ATAAGCGAGAGCTAGGGATA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MTVLLMTPPMTQLNTPYPATAYLTGFLRSQGYEAVQRDPAIELFLEMMTAPALEVIRQHVEENYEHFEDDELPDVIFNFL
AEYDRYHLAVEPAIRFLQGKDPSLALRINSRRFLPEGPAFDTIAQMEAVSGDVLQAAFGNLGVQDKAKYLATLFINDLSS
VITQGVDPYFEVSRYGEKLAAANPSFDNLYDTLMDEPSFSSEILEQLVEQYLEETQPSVVALTVPFPGNMLGALRIAQTC
KAINPEIPIVMGGGFINTELRALKDPRVFEFVDFICLDDGERPFITLLEYFEGQREVDELVRTYFLAEDENGEAYVHFNE
NTELHDIPQTDVGAPVYDGLPLGEYLSLCEMLNPMHRIWSDGRWNKLTIAHGCYWRKCSFCDVSLDYIGRFDATEADVLV
DRIEQLIEETGETGFHFVDEALPPKLLFALAKRLIERKVVISWWGNIRFERTFSQARCQLLAESGCIAVSGGLEVASDRL
LKLMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMQQGCFQSAYWHRFVATVHSPVGINPE
KFGITLTERPEILFAENDVDFIDPTGTDHEMLGEGLRKAIYNYMHGIGFEQPMSFWFNQSVVRTQMKKDLVSKAINNLID
SCEE

Sequences:

>Translated_644_residues
MTVLLMTPPMTQLNTPYPATAYLTGFLRSQGYEAVQRDPAIELFLEMMTAPALEVIRQHVEENYEHFEDDELPDVIFNFL
AEYDRYHLAVEPAIRFLQGKDPSLALRINSRRFLPEGPAFDTIAQMEAVSGDVLQAAFGNLGVQDKAKYLATLFINDLSS
VITQGVDPYFEVSRYGEKLAAANPSFDNLYDTLMDEPSFSSEILEQLVEQYLEETQPSVVALTVPFPGNMLGALRIAQTC
KAINPEIPIVMGGGFINTELRALKDPRVFEFVDFICLDDGERPFITLLEYFEGQREVDELVRTYFLAEDENGEAYVHFNE
NTELHDIPQTDVGAPVYDGLPLGEYLSLCEMLNPMHRIWSDGRWNKLTIAHGCYWRKCSFCDVSLDYIGRFDATEADVLV
DRIEQLIEETGETGFHFVDEALPPKLLFALAKRLIERKVVISWWGNIRFERTFSQARCQLLAESGCIAVSGGLEVASDRL
LKLMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMQQGCFQSAYWHRFVATVHSPVGINPE
KFGITLTERPEILFAENDVDFIDPTGTDHEMLGEGLRKAIYNYMHGIGFEQPMSFWFNQSVVRTQMKKDLVSKAINNLID
SCEE
>Mature_643_residues
TVLLMTPPMTQLNTPYPATAYLTGFLRSQGYEAVQRDPAIELFLEMMTAPALEVIRQHVEENYEHFEDDELPDVIFNFLA
EYDRYHLAVEPAIRFLQGKDPSLALRINSRRFLPEGPAFDTIAQMEAVSGDVLQAAFGNLGVQDKAKYLATLFINDLSSV
ITQGVDPYFEVSRYGEKLAAANPSFDNLYDTLMDEPSFSSEILEQLVEQYLEETQPSVVALTVPFPGNMLGALRIAQTCK
AINPEIPIVMGGGFINTELRALKDPRVFEFVDFICLDDGERPFITLLEYFEGQREVDELVRTYFLAEDENGEAYVHFNEN
TELHDIPQTDVGAPVYDGLPLGEYLSLCEMLNPMHRIWSDGRWNKLTIAHGCYWRKCSFCDVSLDYIGRFDATEADVLVD
RIEQLIEETGETGFHFVDEALPPKLLFALAKRLIERKVVISWWGNIRFERTFSQARCQLLAESGCIAVSGGLEVASDRLL
KLMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMQQGCFQSAYWHRFVATVHSPVGINPEK
FGITLTERPEILFAENDVDFIDPTGTDHEMLGEGLRKAIYNYMHGIGFEQPMSFWFNQSVVRTQMKKDLVSKAINNLIDS
CEE

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 73000; Mature: 72869

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLMTPPMTQLNTPYPATAYLTGFLRSQGYEAVQRDPAIELFLEMMTAPALEVIRQHV
CEEEEECCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EENYEHFEDDELPDVIFNFLAEYDRYHLAVEPAIRFLQGKDPSLALRINSRRFLPEGPAF
HHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH
DTIAQMEAVSGDVLQAAFGNLGVQDKAKYLATLFINDLSSVITQGVDPYFEVSRYGEKLA
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AANPSFDNLYDTLMDEPSFSSEILEQLVEQYLEETQPSVVALTVPFPGNMLGALRIAQTC
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
KAINPEIPIVMGGGFINTELRALKDPRVFEFVDFICLDDGERPFITLLEYFEGQREVDEL
HHCCCCCCEEECCCEECCHHHHCCCCCHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHH
VRTYFLAEDENGEAYVHFNENTELHDIPQTDVGAPVYDGLPLGEYLSLCEMLNPMHRIWS
HHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
DGRWNKLTIAHGCYWRKCSFCDVSLDYIGRFDATEADVLVDRIEQLIEETGETGFHFVDE
CCCCCEEEEECCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
ALPPKLLFALAKRLIERKVVISWWGNIRFERTFSQARCQLLAESGCIAVSGGLEVASDRL
CCCHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
LKLMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMQQGCFQ
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SAYWHRFVATVHSPVGINPEKFGITLTERPEILFAENDVDFIDPTGTDHEMLGEGLRKAI
HHHHHHHHHHHCCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
YNYMHGIGFEQPMSFWFNQSVVRTQMKKDLVSKAINNLIDSCEE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVLLMTPPMTQLNTPYPATAYLTGFLRSQGYEAVQRDPAIELFLEMMTAPALEVIRQHV
EEEEECCCCHHCCCCCCHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EENYEHFEDDELPDVIFNFLAEYDRYHLAVEPAIRFLQGKDPSLALRINSRRFLPEGPAF
HHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCH
DTIAQMEAVSGDVLQAAFGNLGVQDKAKYLATLFINDLSSVITQGVDPYFEVSRYGEKLA
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AANPSFDNLYDTLMDEPSFSSEILEQLVEQYLEETQPSVVALTVPFPGNMLGALRIAQTC
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
KAINPEIPIVMGGGFINTELRALKDPRVFEFVDFICLDDGERPFITLLEYFEGQREVDEL
HHCCCCCCEEECCCEECCHHHHCCCCCHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHH
VRTYFLAEDENGEAYVHFNENTELHDIPQTDVGAPVYDGLPLGEYLSLCEMLNPMHRIWS
HHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
DGRWNKLTIAHGCYWRKCSFCDVSLDYIGRFDATEADVLVDRIEQLIEETGETGFHFVDE
CCCCCEEEEECCCEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
ALPPKLLFALAKRLIERKVVISWWGNIRFERTFSQARCQLLAESGCIAVSGGLEVASDRL
CCCHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
LKLMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMQQGCFQ
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SAYWHRFVATVHSPVGINPEKFGITLTERPEILFAENDVDFIDPTGTDHEMLGEGLRKAI
HHHHHHHHHHHCCCCCCCHHHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
YNYMHGIGFEQPMSFWFNQSVVRTQMKKDLVSKAINNLIDSCEE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]