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The map label for this gene is 167624402

Identifier: 167624402

GI number: 167624402

Start: 2983423

End: 2983887

Strand: Reverse

Name: 167624402

Synonym: Shal_2480

Alternate gene names: NA

Gene position: 2983887-2983423 (Counterclockwise)

Preceding gene: 167624403

Following gene: 167624399

Centisome position: 57.09

GC content: 43.44

Gene sequence:

>465_bases
ATGAAACAGCAAAAAGATGTTGGTGGGATAGCGATCATTATGCGTGGGCTGCCAGGGAGTGGCAAAAGTTACTGGGTAGA
GCAGTACGTTAAGGCACTACCAAAGTATGCTAACGAGAGCACAAGCGTAAAAGTCTGCTCTACGGATGAGTTCTTTTACT
GTGATGGTCAGTACAACTTTGACCCTAAGCACTTATCTAAGTACCACCAACTTAATCTAACGCGATTTATCCATGCAATT
GCCAATAAAGTGCCTGTGGTTATTTGTGATAATACCAATATGGCTCAGTGGGAATTTGAGGGATATTGCGTGGCTGCGAA
AGCTGAAGGTTATCAAGTACAGATCCAGCAGATTGGTGAGCCAAAGGATAAAAATCATCAATTGCTGTGTGCTGACCGAA
ATAAACATCGGGTGCCGCTAAATAGCATTGTGCGAATGGCCAAAACGTTCGAGGCCTGTATATAA

Upstream 100 bases:

>100_bases
GATATTCTCAGTGGAAAAATAGTGAACAACGTACTTTAGCATATGTGCTTAAGCGTATTATTAAGGTTCTCGCGATAACG
CGAGTAAAGGGTAATAGTTG

Downstream 100 bases:

>100_bases
CGGTGAGTCTGTGATTTGCAGGCAATAAAAAAGCCTATAGATAAAATCTATAGGCTTTTTATTAAAGTTTAAAACTCAAA
AGAGTCATAACTAAACAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKQQKDVGGIAIIMRGLPGSGKSYWVEQYVKALPKYANESTSVKVCSTDEFFYCDGQYNFDPKHLSKYHQLNLTRFIHAI
ANKVPVVICDNTNMAQWEFEGYCVAAKAEGYQVQIQQIGEPKDKNHQLLCADRNKHRVPLNSIVRMAKTFEACI

Sequences:

>Translated_154_residues
MKQQKDVGGIAIIMRGLPGSGKSYWVEQYVKALPKYANESTSVKVCSTDEFFYCDGQYNFDPKHLSKYHQLNLTRFIHAI
ANKVPVVICDNTNMAQWEFEGYCVAAKAEGYQVQIQQIGEPKDKNHQLLCADRNKHRVPLNSIVRMAKTFEACI
>Mature_154_residues
MKQQKDVGGIAIIMRGLPGSGKSYWVEQYVKALPKYANESTSVKVCSTDEFFYCDGQYNFDPKHLSKYHQLNLTRFIHAI
ANKVPVVICDNTNMAQWEFEGYCVAAKAEGYQVQIQQIGEPKDKNHQLLCADRNKHRVPLNSIVRMAKTFEACI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119226224, Length=143, Percent_Identity=34.965034965035, Blast_Score=80, Evalue=7e-16,
Organism=Homo sapiens, GI31742492, Length=138, Percent_Identity=34.7826086956522, Blast_Score=74, Evalue=4e-14,
Organism=Homo sapiens, GI119226227, Length=93, Percent_Identity=37.6344086021505, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357685, Length=142, Percent_Identity=32.3943661971831, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17549; Mature: 17549

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQKDVGGIAIIMRGLPGSGKSYWVEQYVKALPKYANESTSVKVCSTDEFFYCDGQYNF
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCC
DPKHLSKYHQLNLTRFIHAIANKVPVVICDNTNMAQWEFEGYCVAAKAEGYQVQIQQIGE
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEEECCCEEEEEEECCC
PKDKNHQLLCADRNKHRVPLNSIVRMAKTFEACI
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQQKDVGGIAIIMRGLPGSGKSYWVEQYVKALPKYANESTSVKVCSTDEFFYCDGQYNF
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCC
DPKHLSKYHQLNLTRFIHAIANKVPVVICDNTNMAQWEFEGYCVAAKAEGYQVQIQQIGE
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEEECCCEEEEEEECCC
PKDKNHQLLCADRNKHRVPLNSIVRMAKTFEACI
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA