Click here to switch to the map view.

The map label for this gene is 167624373

Identifier: 167624373

GI number: 167624373

Start: 2956345

End: 2957478

Strand: Reverse

Name: 167624373

Synonym: Shal_2450

Alternate gene names: NA

Gene position: 2957478-2956345 (Counterclockwise)

Preceding gene: 167624374

Following gene: 167624372

Centisome position: 56.58

GC content: 45.15

Gene sequence:

>1134_bases
ATGCCGCTTAAAACTTGGGTTAGTCAGCGCACGATGACTCAATTAAAGAGTCTTTTTCCTCGGTTATCTCTGAGCCTATC
AGTTGCCATATTTGTTAATATTAGTGTTTCATCAATGGCTAACGCTGATCAGCTTGCTAGTACTTCGACAAACTCGCAAG
CGATAGCAGCAAACCAAGTCGTTGATGATACCTCTGCCACTGCCAGTTTGACCTTGTTAAACAAAGCGGATTTGATGCCA
CTGCTGCTCACCGGACAAGTGGCCTCAGTGGTGTCGCAACCTTTTGTAGTGCCTAAAGCTGGCGATACATGGCGCTATCA
AATTCAATGGATGCTGCCAGAAGGGAGCTTAGCTAAGCCTGGGCAAGTGGTGGTAATTTTCGATAAGAGTGAAATCGATA
ATCGTATTGAACAGCTTGAGGGAAGCTTATTGCGAGTGACGGCGCAGGAGCAGAGTCAATCGATAGAGCTTAATGCACAG
CTATTACAAGCCAAATTTGAGCTTAAACAAGCTAAACTTGAGCTTGAGAAAGCCGAACTCGATGCTGCAATTCCGGCCGA
TTTTATTGCCGCAAAAGACTATGCCGACAATCAATTTAATCAACTCAAAGCTGAGTCTGAACTGTCAAAGAAGCACCAAG
CATTAGCCGAGATATTAGATAAACGAACGGCGTCGTTGTCACAGTTAGCGATTGATAAAAAGCGCGCCGAACTTGAGCTG
TCTCAAGCGTTATCAGGGCTTGAGCAACTCGAACTTCGTGCCGATATCGCAGGTCCTATGCTTTATTCTCGAGATCCTTG
GAGTGACAAGAAATATTCGGTGGGCGATAACGCTCAAATAGGCAGACAAGTCGCCAATATTCCCGCACTTGATGATTTAG
AGGTGATTGCTTGGGTCAATGAAGTCGATGTGGATCGCATCAGCATTGGCGAACCCGTACGCTTAAGGCTTGATTCTCAG
TCTAAAACCACCCTCAATGGCAGCATCAATGACATCAGTCGCCAAGCTCGTAAACAACCTGCTTGGGGCAACAGTAACTG
GTTTAAAATTTCGATTAAATTTGTTGTAGATGACAGGGTAGAAATTATTCCTGGTATGAGTGTGTTAGTCGAAACAGGAG
TCGCTCCATCATGA

Upstream 100 bases:

>100_bases
ATTATCTTGGTGACCCACGAAGAAGAAGTGGCCGCTTATGCTCAGCGGATTATTCGAATGCGAGATGGCGATATTGTAGA
GATCGAAGAGAGAGGTGAAA

Downstream 100 bases:

>100_bases
AGATGACAGCCATAAATACATTTATGCTGGCCGCGCTGCTCACAGGATGTAGTCAAAATGCAGTGACTCAAGTTGAGTCA
GGAATTTTAGAGCAACAAAT

Product: multidrug resistance efflux pump-like protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Membrane-Fusion Protein-Like Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPLKTWVSQRTMTQLKSLFPRLSLSLSVAIFVNISVSSMANADQLASTSTNSQAIAANQVVDDTSATASLTLLNKADLMP
LLLTGQVASVVSQPFVVPKAGDTWRYQIQWMLPEGSLAKPGQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQ
LLQAKFELKQAKLELEKAELDAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTASLSQLAIDKKRAELEL
SQALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQVANIPALDDLEVIAWVNEVDVDRISIGEPVRLRLDSQ
SKTTLNGSINDISRQARKQPAWGNSNWFKISIKFVVDDRVEIIPGMSVLVETGVAPS

Sequences:

>Translated_377_residues
MPLKTWVSQRTMTQLKSLFPRLSLSLSVAIFVNISVSSMANADQLASTSTNSQAIAANQVVDDTSATASLTLLNKADLMP
LLLTGQVASVVSQPFVVPKAGDTWRYQIQWMLPEGSLAKPGQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQ
LLQAKFELKQAKLELEKAELDAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTASLSQLAIDKKRAELEL
SQALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQVANIPALDDLEVIAWVNEVDVDRISIGEPVRLRLDSQ
SKTTLNGSINDISRQARKQPAWGNSNWFKISIKFVVDDRVEIIPGMSVLVETGVAPS
>Mature_376_residues
PLKTWVSQRTMTQLKSLFPRLSLSLSVAIFVNISVSSMANADQLASTSTNSQAIAANQVVDDTSATASLTLLNKADLMPL
LLTGQVASVVSQPFVVPKAGDTWRYQIQWMLPEGSLAKPGQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQL
LQAKFELKQAKLELEKAELDAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTASLSQLAIDKKRAELELS
QALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQVANIPALDDLEVIAWVNEVDVDRISIGEPVRLRLDSQS
KTTLNGSINDISRQARKQPAWGNSNWFKISIKFVVDDRVEIIPGMSVLVETGVAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41441; Mature: 41309

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKTWVSQRTMTQLKSLFPRLSLSLSVAIFVNISVSSMANADQLASTSTNSQAIAANQV
CCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEHHHHCCHHHHHCCCCCCCEEEHHHH
VDDTSATASLTLLNKADLMPLLLTGQVASVVSQPFVVPKAGDTWRYQIQWMLPEGSLAKP
CCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCEEEECCCCCEEEEEEEECCCCCCCCC
GQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQLLQAKFELKQAKLELEKAEL
CCEEEEECCHHHHHHHHHHCCCEEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC
DAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTASLSQLAIDKKRAELEL
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQVANIPALDDLEVIAWVN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
EVDVDRISIGEPVRLRLDSQSKTTLNGSINDISRQARKQPAWGNSNWFKISIKFVVDDRV
CCCCCEEECCCCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCE
EIIPGMSVLVETGVAPS
EECCCCHHHHCCCCCCC
>Mature Secondary Structure 
PLKTWVSQRTMTQLKSLFPRLSLSLSVAIFVNISVSSMANADQLASTSTNSQAIAANQV
CCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEHHHHCCHHHHHCCCCCCCEEEHHHH
VDDTSATASLTLLNKADLMPLLLTGQVASVVSQPFVVPKAGDTWRYQIQWMLPEGSLAKP
CCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHCCEEEECCCCCEEEEEEEECCCCCCCCC
GQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQLLQAKFELKQAKLELEKAEL
CCEEEEECCHHHHHHHHHHCCCEEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC
DAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTASLSQLAIDKKRAELEL
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQVANIPALDDLEVIAWVN
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
EVDVDRISIGEPVRLRLDSQSKTTLNGSINDISRQARKQPAWGNSNWFKISIKFVVDDRV
CCCCCEEECCCCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCE
EIIPGMSVLVETGVAPS
EECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA