Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624366

Identifier: 167624366

GI number: 167624366

Start: 2948167

End: 2949324

Strand: Reverse

Name: 167624366

Synonym: Shal_2443

Alternate gene names: NA

Gene position: 2949324-2948167 (Counterclockwise)

Preceding gene: 167624367

Following gene: 167624365

Centisome position: 56.43

GC content: 45.51

Gene sequence:

>1158_bases
ATGTTGCATAAACTCTTTTCTAATCGTGGCGGGAGTCTGGATGCAGGTGAAGCAAAACTTTGGTCTGAATTCGTAACGCA
GAATTTGACCCGTCAAGATAATATGCCTGAGACCGTTCAGCCAAGCCCTTGGTATATAAAATTGATGCAAACATTTGCCG
CTTGGGTGGCTTCACTGTTCATTCTTGCCTTTAGCATCAGCTTTTTTAACCTCTTCTTCGATGATTTAGACACTGGCTTC
GCGACTATTGTGGGGATATTTTACAGCGGCTTTGGCATTTTGCTCTATCGCCTCAGGGCTGCTAAGTCGTTGTTTGTTAA
TCAGATGGCACTCGCCTTAAGCCTATGTGGACTGCTGTCGCTTGGCTATGGCATGACAGGCTGGTTCGCCGACAGCTTAG
GCGAGAATATTGGACTCGCATGGTATTTAACCTTTGGGGGTATTTTACTGCTCAATTGGTTTTGGATAGGGCACGCTAGC
CACCAATATGTGATGAGCTTTGCCATGATAGCCTGTCTGGTCGGTGCTGGTTATGAGCTAAGTCTACTTGAGCTTATGCC
AACGCTCATCATGTTACTGTTTGCCATTGTCTGGTTGAACCACGGTAAAAGCGGCAGACATCTTGCCCGTTTGAGTGCCC
TTGGCCATATGCTCGCCTTGTGGGTGATACTCATTCAGTTACCACTCTTAGCGAATCATTCAACAGCCAGCCAATCTGTA
TTAATCACTGGAGATAACCTTCCCATATTGGCTACATGGACCAATGTGTTATCAGTAGTTACAACGCTAATTGTCTTAGT
CATATTGCTGGTGCAGATTTTACGGTCATTACCCTTAAGCCTGAGCAGTAAGCAGGCGCAGATAAGCGCACTAGCAATTC
TGCTGCTGGCAGGGCTTGCTATCCCTATGACGGGTCTATCGGCAGCAGTGTTGGTGATAATGTTGGGCTTTTACGTCAGA
GAAAGAGCCGTTTTCTTCATAGGCCTTACAGGATTATTGAGTTTTATTGGATGGTACTACTACAGTTTGCAGTTACCCCT
ACTGGAAAAGTCACTCTGGTTGATCTCATTAGGCGCATTACTGATCTTAGCTAAGTTACTATTAACTTGGCTTTTACCTA
AGCTGGATAAGCATGGGGGAGAGCAGCATGAAGGTTAA

Upstream 100 bases:

>100_bases
ATGTTGTTAGTATTAGGGTTAACCATTATTGGCTCAACGAGCTTGCTCTCTTTATGGCTTAAGCAGCGTCAGCAAGCTTT
TCAACTGGATAGGGGGCACG

Downstream 100 bases:

>100_bases
GTTACCCATCTCAGTTTATATTCTGATAGCGACCATTTTTGCCATATTGACCTTGGTTAATTGGGATATCTATCAAAAAG
AGCAGCATTTAGCTCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLHKLFSNRGGSLDAGEAKLWSEFVTQNLTRQDNMPETVQPSPWYIKLMQTFAAWVASLFILAFSISFFNLFFDDLDTGF
ATIVGIFYSGFGILLYRLRAAKSLFVNQMALALSLCGLLSLGYGMTGWFADSLGENIGLAWYLTFGGILLLNWFWIGHAS
HQYVMSFAMIACLVGAGYELSLLELMPTLIMLLFAIVWLNHGKSGRHLARLSALGHMLALWVILIQLPLLANHSTASQSV
LITGDNLPILATWTNVLSVVTTLIVLVILLVQILRSLPLSLSSKQAQISALAILLLAGLAIPMTGLSAAVLVIMLGFYVR
ERAVFFIGLTGLLSFIGWYYYSLQLPLLEKSLWLISLGALLILAKLLLTWLLPKLDKHGGEQHEG

Sequences:

>Translated_385_residues
MLHKLFSNRGGSLDAGEAKLWSEFVTQNLTRQDNMPETVQPSPWYIKLMQTFAAWVASLFILAFSISFFNLFFDDLDTGF
ATIVGIFYSGFGILLYRLRAAKSLFVNQMALALSLCGLLSLGYGMTGWFADSLGENIGLAWYLTFGGILLLNWFWIGHAS
HQYVMSFAMIACLVGAGYELSLLELMPTLIMLLFAIVWLNHGKSGRHLARLSALGHMLALWVILIQLPLLANHSTASQSV
LITGDNLPILATWTNVLSVVTTLIVLVILLVQILRSLPLSLSSKQAQISALAILLLAGLAIPMTGLSAAVLVIMLGFYVR
ERAVFFIGLTGLLSFIGWYYYSLQLPLLEKSLWLISLGALLILAKLLLTWLLPKLDKHGGEQHEG
>Mature_385_residues
MLHKLFSNRGGSLDAGEAKLWSEFVTQNLTRQDNMPETVQPSPWYIKLMQTFAAWVASLFILAFSISFFNLFFDDLDTGF
ATIVGIFYSGFGILLYRLRAAKSLFVNQMALALSLCGLLSLGYGMTGWFADSLGENIGLAWYLTFGGILLLNWFWIGHAS
HQYVMSFAMIACLVGAGYELSLLELMPTLIMLLFAIVWLNHGKSGRHLARLSALGHMLALWVILIQLPLLANHSTASQSV
LITGDNLPILATWTNVLSVVTTLIVLVILLVQILRSLPLSLSSKQAQISALAILLLAGLAIPMTGLSAAVLVIMLGFYVR
ERAVFFIGLTGLLSFIGWYYYSLQLPLLEKSLWLISLGALLILAKLLLTWLLPKLDKHGGEQHEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42470; Mature: 42470

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA