| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624346
Identifier: 167624346
GI number: 167624346
Start: 2924773
End: 2924994
Strand: Reverse
Name: 167624346
Synonym: Shal_2423
Alternate gene names: NA
Gene position: 2924994-2924773 (Counterclockwise)
Preceding gene: 167624351
Following gene: 167624345
Centisome position: 55.96
GC content: 36.04
Gene sequence:
>222_bases ATGGATTGCAACTTAGAAATAATACTTATCGATGAAACAGGTCAGATCATTCAAGATGATAAACGGGGTACTATTTCAGC TAATGCAGAGAACATCCCGAATAGACTCAATATTCCAAGTGATAATTGGCTAAAGCTTACTACTGAATTCGGTAAGTTAC TTCATGGACCTGTAAGGGCACGGCAGGAATTAACTTATTATTGTGAGCATTTAGAAAAATGA
Upstream 100 bases:
>100_bases ACATTGCTAAATATCTACATTTCAATAACTTATCAAAATCTCGGGAGTATATCGAGCATAAAGAATTCGCTTTAGCTAAC TTTGATCACATTTTCTAAAA
Downstream 100 bases:
>100_bases CGGCAGCACTTTGCTAACAGTTGTCAGTATCTCTTAGTCAGTAAGTCAGTTAGTCAATTTAAATAATTAGCCCACTCTGT TCTTAGATCCATTCAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MDCNLEIILIDETGQIIQDDKRGTISANAENIPNRLNIPSDNWLKLTTEFGKLLHGPVRARQELTYYCEHLEK
Sequences:
>Translated_73_residues MDCNLEIILIDETGQIIQDDKRGTISANAENIPNRLNIPSDNWLKLTTEFGKLLHGPVRARQELTYYCEHLEK >Mature_73_residues MDCNLEIILIDETGQIIQDDKRGTISANAENIPNRLNIPSDNWLKLTTEFGKLLHGPVRARQELTYYCEHLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8411; Mature: 8411
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCNLEIILIDETGQIIQDDKRGTISANAENIPNRLNIPSDNWLKLTTEFGKLLHGPVRA CCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHH RQELTYYCEHLEK HHHHHHHHHHHCC >Mature Secondary Structure MDCNLEIILIDETGQIIQDDKRGTISANAENIPNRLNIPSDNWLKLTTEFGKLLHGPVRA CCCCEEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHH RQELTYYCEHLEK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA