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The map label for this gene is 167624327

Identifier: 167624327

GI number: 167624327

Start: 2904361

End: 2905155

Strand: Reverse

Name: 167624327

Synonym: Shal_2404

Alternate gene names: NA

Gene position: 2905155-2904361 (Counterclockwise)

Preceding gene: 167624330

Following gene: 167624326

Centisome position: 55.58

GC content: 44.15

Gene sequence:

>795_bases
ATGGTGAACACGGATCTTACCGTTCTGATAAGACATAGTGTGGCTTGGGCTGGCTTTTTTAAAAGGCAAGCCAAGGTTGT
CGTGTGTCTGTTTGTTTTATCCCCCCCCTGGGTGACTTATGCCGATACGCTGTATTTGACGTCAGTTCATTGGCCACCTT
TCGCTGGAGAGCAGCTGAAAAATCAGGGCGCTTGCATTGCTGTGACAAGAGCAGCGCTAGATGCGGTTGGCCATAAAGTT
ATCGTGGATTTTTACCCTTGGAGTCGAGCGGTGAGAATGGCATCGCGAAATGATTCTAAATATCTTGGTTATCTACCTGA
ATATGCTTATCCAACAGACAAGTTTGTTTTTTCTGAGTCGATGGGCCGAAGTGGCTTAGGTTTACTGGAACAAAAATCTC
ACCCCATTAGCTGGACGCAGCAGAGCGACTTGAATCACTACACGATTGGAGTGGTTCAAGGCTATGTCAATACCACTGAA
CTGGACGGAATGATGGCACAAGGAACGCAGCCTTTTGAGGCGGTGGCGTCGGATCAACATAATGTGAATAAGGTGGCTAC
TGGTCGAGTCGATGCCGCGATTATTGATGAGCATGTGCTGCAGTATATTTTGGCTCAACCGAATATGGGGGCTGTTAAGA
ATAAGCTGCAATTTAATAAGAAGCTTTTAACTTATAAAGAGTTATTTGTAGCATTTAAAAATAATGAAGAAGGGCGAAAA
TGGCGAGATCGCTTTAATCAAGGCCTAACTCAAATTGATGTACAACAGATCTTAGAAACAAATATGCGTCAATAG

Upstream 100 bases:

>100_bases
GCCGTTATCCCAATCATTGACTAAAATTAGGGGGAGGTTTAGTTAAACTGGTACTGAACTCCTAGCGTTTTTGTGATGGT
TTTAGTACGTAAAAGGCAAG

Downstream 100 bases:

>100_bases
TGCTACTTTTAACCTGTGGGCAAGACATAGAGTCTAGCGGAGCACTGATGGCGACAGTTGTACTTGTACGTGGTTTGATG
CGTGATAAACGGCATTGGAT

Product: ABC transporter

Products: NA

Alternate protein names: ABC Transporter; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; Sugar ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVNTDLTVLIRHSVAWAGFFKRQAKVVVCLFVLSPPWVTYADTLYLTSVHWPPFAGEQLKNQGACIAVTRAALDAVGHKV
IVDFYPWSRAVRMASRNDSKYLGYLPEYAYPTDKFVFSESMGRSGLGLLEQKSHPISWTQQSDLNHYTIGVVQGYVNTTE
LDGMMAQGTQPFEAVASDQHNVNKVATGRVDAAIIDEHVLQYILAQPNMGAVKNKLQFNKKLLTYKELFVAFKNNEEGRK
WRDRFNQGLTQIDVQQILETNMRQ

Sequences:

>Translated_264_residues
MVNTDLTVLIRHSVAWAGFFKRQAKVVVCLFVLSPPWVTYADTLYLTSVHWPPFAGEQLKNQGACIAVTRAALDAVGHKV
IVDFYPWSRAVRMASRNDSKYLGYLPEYAYPTDKFVFSESMGRSGLGLLEQKSHPISWTQQSDLNHYTIGVVQGYVNTTE
LDGMMAQGTQPFEAVASDQHNVNKVATGRVDAAIIDEHVLQYILAQPNMGAVKNKLQFNKKLLTYKELFVAFKNNEEGRK
WRDRFNQGLTQIDVQQILETNMRQ
>Mature_264_residues
MVNTDLTVLIRHSVAWAGFFKRQAKVVVCLFVLSPPWVTYADTLYLTSVHWPPFAGEQLKNQGACIAVTRAALDAVGHKV
IVDFYPWSRAVRMASRNDSKYLGYLPEYAYPTDKFVFSESMGRSGLGLLEQKSHPISWTQQSDLNHYTIGVVQGYVNTTE
LDGMMAQGTQPFEAVASDQHNVNKVATGRVDAAIIDEHVLQYILAQPNMGAVKNKLQFNKKLLTYKELFVAFKNNEEGRK
WRDRFNQGLTQIDVQQILETNMRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29908; Mature: 29908

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNTDLTVLIRHSVAWAGFFKRQAKVVVCLFVLSPPWVTYADTLYLTSVHWPPFAGEQLK
CCCCCEEEEEHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCHHHH
NQGACIAVTRAALDAVGHKVIVDFYPWSRAVRMASRNDSKYLGYLPEYAYPTDKFVFSES
CCCCEEEHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHH
MGRSGLGLLEQKSHPISWTQQSDLNHYTIGVVQGYVNTTELDGMMAQGTQPFEAVASDQH
CCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCHHHCCCCHHHHHHCCCC
NVNKVATGRVDAAIIDEHVLQYILAQPNMGAVKNKLQFNKKLLTYKELFVAFKNNEEGRK
CCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
WRDRFNQGLTQIDVQQILETNMRQ
HHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNTDLTVLIRHSVAWAGFFKRQAKVVVCLFVLSPPWVTYADTLYLTSVHWPPFAGEQLK
CCCCCEEEEEHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCHHHH
NQGACIAVTRAALDAVGHKVIVDFYPWSRAVRMASRNDSKYLGYLPEYAYPTDKFVFSES
CCCCEEEHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHH
MGRSGLGLLEQKSHPISWTQQSDLNHYTIGVVQGYVNTTELDGMMAQGTQPFEAVASDQH
CCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCHHHCCCCHHHHHHCCCC
NVNKVATGRVDAAIIDEHVLQYILAQPNMGAVKNKLQFNKKLLTYKELFVAFKNNEEGRK
CCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
WRDRFNQGLTQIDVQQILETNMRQ
HHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA