| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is estA [H]
Identifier: 167624314
GI number: 167624314
Start: 2892622
End: 2893302
Strand: Reverse
Name: estA [H]
Synonym: Shal_2391
Alternate gene names: 167624314
Gene position: 2893302-2892622 (Counterclockwise)
Preceding gene: 167624316
Following gene: 167624313
Centisome position: 55.35
GC content: 48.16
Gene sequence:
>681_bases ATGTCTGACTCCAAGCTTGAGCGTATTACGATAGAACCAACCCAAGAGGCAAAAGCCTGCGTTATCTGGCTTCATGGCCT AGGAGACTCTGGTGCAGGTTTTGCTCCTGTTGTACCAGCATTAGGCTTAGGTAGTGAGCATGGGATCCGCTTTATATTCC CTCATGCGCCAGAGCAAGCCGTCACCATTAACGGTGGCTATATTATGCGTGCTTGGTATGACATTAAGAGTATGGATCTA CATGAGCGAGCGGATAAGCAAGGTGTCGAGCAGAGTGAGCAACAGATCATCGCTTTGATTGAAGAACAAATAGCGCTCGG GATCCCAACTGAAAACATTGTGTTAGCCGGCTTTAGTCAAGGCGGGGTGATGAGCCTGCACACAGGCCTTCGGTTACCGC ATAAGCTGGCTGGGATAATGGCGCTTTCTTGCTACCTTCCAAGTGGTGACTCCCTCCCCAAAGGACTTTCAAATGTAAAT CGTGACACGTCAATCATACAGCACCACGGTGTTGAAGATGATGTAGTTCCAGTATATGCAGGTGAAATGGCCTTTAAACT ACTGCAAGGCGAGGGGTTTAATACCCAATGGAAAACTTACAACATGGCCCACAACGTTTTGCCCGAGCAGCTACAAGATA TTTCGCTTTGGCTGCAATCAGTGCTGCCATACGGTAAGTAA
Upstream 100 bases:
>100_bases TTACCGTCGCGGTTCTTTAAGGGGCGGCACTATGGGCTAACTCCCTATAGGCTGGTAATATCAAGGCGAATTTAACAAAT AGTCATTTTTAAGGGATACA
Downstream 100 bases:
>100_bases AATCTATTTGCTTGTTTTTTGCACAGACTGGCCGCGATACTTTCGTTGCCAGCTGTTCCGTAATCGGGATAATTAACGGC ATTCCTTCTTGGCTTTAACT
Product: carboxylesterase
Products: NA
Alternate protein names: Esterase I [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSDSKLERITIEPTQEAKACVIWLHGLGDSGAGFAPVVPALGLGSEHGIRFIFPHAPEQAVTINGGYIMRAWYDIKSMDL HERADKQGVEQSEQQIIALIEEQIALGIPTENIVLAGFSQGGVMSLHTGLRLPHKLAGIMALSCYLPSGDSLPKGLSNVN RDTSIIQHHGVEDDVVPVYAGEMAFKLLQGEGFNTQWKTYNMAHNVLPEQLQDISLWLQSVLPYGK
Sequences:
>Translated_226_residues MSDSKLERITIEPTQEAKACVIWLHGLGDSGAGFAPVVPALGLGSEHGIRFIFPHAPEQAVTINGGYIMRAWYDIKSMDL HERADKQGVEQSEQQIIALIEEQIALGIPTENIVLAGFSQGGVMSLHTGLRLPHKLAGIMALSCYLPSGDSLPKGLSNVN RDTSIIQHHGVEDDVVPVYAGEMAFKLLQGEGFNTQWKTYNMAHNVLPEQLQDISLWLQSVLPYGK >Mature_225_residues SDSKLERITIEPTQEAKACVIWLHGLGDSGAGFAPVVPALGLGSEHGIRFIFPHAPEQAVTINGGYIMRAWYDIKSMDLH ERADKQGVEQSEQQIIALIEEQIALGIPTENIVLAGFSQGGVMSLHTGLRLPHKLAGIMALSCYLPSGDSLPKGLSNVNR DTSIIQHHGVEDDVVPVYAGEMAFKLLQGEGFNTQWKTYNMAHNVLPEQLQDISLWLQSVLPYGK
Specific function: Hydrolyzes carboxylic ester bonds with relatively broad substrate specificity [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
Organism=Homo sapiens, GI5453722, Length=217, Percent_Identity=39.63133640553, Blast_Score=158, Evalue=3e-39, Organism=Homo sapiens, GI9966764, Length=217, Percent_Identity=36.8663594470046, Blast_Score=150, Evalue=7e-37, Organism=Homo sapiens, GI20270341, Length=227, Percent_Identity=29.0748898678414, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17508057, Length=212, Percent_Identity=34.9056603773585, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323147, Length=215, Percent_Identity=35.8139534883721, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI45553055, Length=216, Percent_Identity=34.7222222222222, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI45553057, Length=216, Percent_Identity=34.7222222222222, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI21357257, Length=216, Percent_Identity=34.7222222222222, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI161078179, Length=220, Percent_Identity=33.6363636363636, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 24697; Mature: 24565
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKLERITIEPTQEAKACVIWLHGLGDSGAGFAPVVPALGLGSEHGIRFIFPHAPEQA CCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCE VTINGGYIMRAWYDIKSMDLHERADKQGVEQSEQQIIALIEEQIALGIPTENIVLAGFSQ EEECCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC GGVMSLHTGLRLPHKLAGIMALSCYLPSGDSLPKGLSNVNRDTSIIQHHGVEDDVVPVYA CCEEEECCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEEEH GEMAFKLLQGEGFNTQWKTYNMAHNVLPEQLQDISLWLQSVLPYGK HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDSKLERITIEPTQEAKACVIWLHGLGDSGAGFAPVVPALGLGSEHGIRFIFPHAPEQA CCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCE VTINGGYIMRAWYDIKSMDLHERADKQGVEQSEQQIIALIEEQIALGIPTENIVLAGFSQ EEECCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC GGVMSLHTGLRLPHKLAGIMALSCYLPSGDSLPKGLSNVNRDTSIIQHHGVEDDVVPVYA CCEEEECCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEEEH GEMAFKLLQGEGFNTQWKTYNMAHNVLPEQLQDISLWLQSVLPYGK HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA