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The map label for this gene is ycbW [H]

Identifier: 167624279

GI number: 167624279

Start: 2846498

End: 2847031

Strand: Reverse

Name: ycbW [H]

Synonym: Shal_2355

Alternate gene names: 167624279

Gene position: 2847031-2846498 (Counterclockwise)

Preceding gene: 167624280

Following gene: 167624277

Centisome position: 54.47

GC content: 39.14

Gene sequence:

>534_bases
ATGTTATTAATGCCAAAAAGGGATTGGCAGTGGGGGTATAATGAAACGCACGGAGTATTAAGTGTTTCGTTAGGAGACGA
CATGGAGTTTTTGTCGGCTTATAAATTAAAAACCCTGATACCAGATGCCAAAGAGCCAATGGAGTTTAGCGTTGAACATG
CTAAGTTCTATATTGATTTGGTTGATCGTTTATCAAAGTCACTTGCATTAAATGATGCGCTAATAGTTCAAATAGCGCTA
AATGCCACAGCGGCTCATTTCTTACTAAAACCCCAGATGCCTAAATCTTGGTTTTTTAATGTGTCACATCAATGTGTTTA
TAGCGAAGTCGGCAAGCTCTTTCAATTAACGACCAGTGAGCATACGGTACTTGCTATGGTGATAGAGTCCGGTCTGCAAG
CATCTTTGGTCATGATCATGTCTGTAGAATGTCGTTTAACTGACACTAAGAAACTTAAACAGTTTGAAACGATTAAAGTT
ATGCACGATAGGCTTGCACCTTTGCCTATTCAGAAACAAGTTAACGCTGCTTAA

Upstream 100 bases:

>100_bases
TTTTTATTTAGATATTAGATTTGATTTCGAACCAAATTTATTTTGATATTGATGAAATAATCATCTATTATTCAATTGTA
TCTAAATAAAGGTAAACGTT

Downstream 100 bases:

>100_bases
AAGTTTACCCTTAGATTGAGTTTGCTTTTTCAGCAGGCCACATTCAGATCCGTGCTGGTTGTTTTCTATACATAGGCTGG
TCTGGATAATCCCATTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLLMPKRDWQWGYNETHGVLSVSLGDDMEFLSAYKLKTLIPDAKEPMEFSVEHAKFYIDLVDRLSKSLALNDALIVQIAL
NATAAHFLLKPQMPKSWFFNVSHQCVYSEVGKLFQLTTSEHTVLAMVIESGLQASLVMIMSVECRLTDTKKLKQFETIKV
MHDRLAPLPIQKQVNAA

Sequences:

>Translated_177_residues
MLLMPKRDWQWGYNETHGVLSVSLGDDMEFLSAYKLKTLIPDAKEPMEFSVEHAKFYIDLVDRLSKSLALNDALIVQIAL
NATAAHFLLKPQMPKSWFFNVSHQCVYSEVGKLFQLTTSEHTVLAMVIESGLQASLVMIMSVECRLTDTKKLKQFETIKV
MHDRLAPLPIQKQVNAA
>Mature_177_residues
MLLMPKRDWQWGYNETHGVLSVSLGDDMEFLSAYKLKTLIPDAKEPMEFSVEHAKFYIDLVDRLSKSLALNDALIVQIAL
NATAAHFLLKPQMPKSWFFNVSHQCVYSEVGKLFQLTTSEHTVLAMVIESGLQASLVMIMSVECRLTDTKKLKQFETIKV
MHDRLAPLPIQKQVNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=170, Percent_Identity=32.3529411764706, Blast_Score=90, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20098; Mature: 20098

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLMPKRDWQWGYNETHGVLSVSLGDDMEFLSAYKLKTLIPDAKEPMEFSVEHAKFYIDL
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VDRLSKSLALNDALIVQIALNATAAHFLLKPQMPKSWFFNVSHQCVYSEVGKLFQLTTSE
HHHHHHHHCCCCEEEEEEEECCHHHHEEECCCCCHHHEECCCHHHHHHHHHHHEEECCCC
HTVLAMVIESGLQASLVMIMSVECRLTDTKKLKQFETIKVMHDRLAPLPIQKQVNAA
CEEEHHHHHCCCHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLLMPKRDWQWGYNETHGVLSVSLGDDMEFLSAYKLKTLIPDAKEPMEFSVEHAKFYIDL
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VDRLSKSLALNDALIVQIALNATAAHFLLKPQMPKSWFFNVSHQCVYSEVGKLFQLTTSE
HHHHHHHHCCCCEEEEEEEECCHHHHEEECCCCCHHHEECCCHHHHHHHHHHHEEECCCC
HTVLAMVIESGLQASLVMIMSVECRLTDTKKLKQFETIKVMHDRLAPLPIQKQVNAA
CEEEHHHHHCCCHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]