Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yffB [H]

Identifier: 167624233

GI number: 167624233

Start: 2794269

End: 2794658

Strand: Direct

Name: yffB [H]

Synonym: Shal_2309

Alternate gene names: 167624233

Gene position: 2794269-2794658 (Clockwise)

Preceding gene: 167624232

Following gene: 167624234

Centisome position: 53.46

GC content: 40.51

Gene sequence:

>390_bases
ATGACACAATGCAAACAACTTATAAAAACAGATTGGAGTACCCTTTTGACACTTTTCGGAATTAAGAATTGCGATACTGT
ACGTAAAGCACGTAAATGGCTTGAAGCTAATCAACTTGAAGTTGCTTTTCATGATTTTCGTGAAGATGGGCTCAGTACAG
AGCAAATAGAACAATGGGTCAGTGCAATCGGCTGGGAAGCCTTATTCAATAAGAGAAGTACCAGTTATAGAAATCTTACC
GAAACTGAAAAGAATGACATCAATGAGAAGAAGGCTGTAGCCTTGATGGCACTATACCCAACCTTGATCAAGCGCCCCGT
TTTAGCGATGAATGGACAAGTCCAGGTGGGTTTTAAAGAAGCTGACTATCGAACGTGGTTCAACCTATGA

Upstream 100 bases:

>100_bases
TAATTTTTATTAGGCTTTTTCATCAACGCAAACCAGAGTTCATATCAAGCATTGAATAACACTCAACAAGGGTTTTCCCC
CTTGAGCAGAGCCAAAAGCA

Downstream 100 bases:

>100_bases
GCCAAAATACAGACTCTCCAGTACTTTCATTAGCCAAAGACCTTATTTCTCGTCAATCGGTCACACCTTTAGATGAAGGT
TGCCAGCAACTCATGGCTGA

Product: arsenate reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTQCKQLIKTDWSTLLTLFGIKNCDTVRKARKWLEANQLEVAFHDFREDGLSTEQIEQWVSAIGWEALFNKRSTSYRNLT
ETEKNDINEKKAVALMALYPTLIKRPVLAMNGQVQVGFKEADYRTWFNL

Sequences:

>Translated_129_residues
MTQCKQLIKTDWSTLLTLFGIKNCDTVRKARKWLEANQLEVAFHDFREDGLSTEQIEQWVSAIGWEALFNKRSTSYRNLT
ETEKNDINEKKAVALMALYPTLIKRPVLAMNGQVQVGFKEADYRTWFNL
>Mature_128_residues
TQCKQLIKTDWSTLLTLFGIKNCDTVRKARKWLEANQLEVAFHDFREDGLSTEQIEQWVSAIGWEALFNKRSTSYRNLTE
TEKNDINEKKAVALMALYPTLIKRPVLAMNGQVQVGFKEADYRTWFNL

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=116, Percent_Identity=46.551724137931, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 15048; Mature: 14917

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQCKQLIKTDWSTLLTLFGIKNCDTVRKARKWLEANQLEVAFHDFREDGLSTEQIEQWV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
SAIGWEALFNKRSTSYRNLTETEKNDINEKKAVALMALYPTLIKRPVLAMNGQVQVGFKE
HHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEC
ADYRTWFNL
CCCHHHCCC
>Mature Secondary Structure 
TQCKQLIKTDWSTLLTLFGIKNCDTVRKARKWLEANQLEVAFHDFREDGLSTEQIEQWV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
SAIGWEALFNKRSTSYRNLTETEKNDINEKKAVALMALYPTLIKRPVLAMNGQVQVGFKE
HHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEC
ADYRTWFNL
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]