Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624189

Identifier: 167624189

GI number: 167624189

Start: 2747455

End: 2749236

Strand: Direct

Name: 167624189

Synonym: Shal_2265

Alternate gene names: NA

Gene position: 2747455-2749236 (Clockwise)

Preceding gene: 167624188

Following gene: 167624190

Centisome position: 52.56

GC content: 42.82

Gene sequence:

>1782_bases
ATGAAGAATATTAGATTTGAATTTAATTGTAGCCGAGAAGTGCCATTTTATGGGCACCTCTGTAATCAATACCTACAAAA
CGAACAATATGATGTGACTATTGGTGAACTAGATAATCTTTACTATATCGAGGCGAAAGGCGAACAAGCGCAACTTGAAC
AACTAGCCGATGCGATAGCGAACGATTTCTTAATTTCAGCTTGGCTAGTAAAGCCTCAAATCTGTGCAATCGACAGTCCT
ATCGGCACGAAGAAGCTACTCCCATCAAGACCACTCGAAATCGAATACTGTCAACATTGCCAACCACAGTTTGGTGATAA
TCAGGCAGCACATTTTGGTGACGTCGGATTTGACTGCCCTTGCTGTCAGGCACAAAAACGTATCACCTCAGCCGAGAAGG
CCGTCTCCTTAGCCGATGCCAGAGCCTTAGTCAAAAAACTCGATAAGCTCGGGTCAATAGTACTGCCCCATAGTAACCTA
GGTGCAGGCACTATTATTAGTTTCCAACCCATTGAAAACCAACCTCGAGAAGCTCGGCAACAGTTGGTGATCTGTAATCC
TAATAACTTGCACGCGCACTTTTCTGTGAACGATAACCAAATACTTGCACTTTCGAGCATCGAGAAGCCTTTTATAAAAG
CTAGGCCTATCAGGAGCCACACTCGACTCAAGCAGCCTTTATACGAGATCTGTTTTGCAAAATCGCGACTATTACTGGTG
ATCTGTGAAATTCTTCGTCAGCAAGGCATCGATTACGTCTATATTGCTAACGTAGATAACCCTAAGATTGCCATGGTTGA
AGCTAAATGGTCGTTGATAGAAACACCTGCAACAACGAAGGTGCTAGTCATTGAAGCAACTAGACAACCTTTACACGATG
ACGCACAGGCTGGTAACTATCAGGCAAAGTGGGCTGCAGATCATATTGAAATCATCGCTAACCAACCATGTACCAATGAA
GACAATGCAATAGCCCCCATCAATAGCGCTGCTAGTTGCGCTCTGCATAGTGCGGTGATTGGTGAAAATAAACCTAGAAA
TATAGCAGCTTTATACTTCAGCAGTTCAAGTAAGACGCAGATAGTCACGCTAGATAGCAAACAAAATCTAGAATTATTTT
TTGAATTTCCAAGCTTGCCCGATAACGGCTATGACATAGTGCACCAGCTTGAACTATCACCTCAAAAGGCCTTACTAGAT
AAATTCAAAACTCTATACCCTGATGATTACCTTAAGCTTTTATCTTTAAAGCTGGCACACCCGACCAATAATATTGAGTC
ATTGTGGGCTATTGCTGCTGTCTTTCTCGGTGCAACGACCCAAACACAGCATAATCAATCCTCAAGTAAAATAGTGCCCT
TAAGCAAGACTGAACTTTGTGATTTTGTGGTAGCCCGCGCGATGTGCCACAAAGGTGCCAACGCGCCAAGGGTCGATTTC
CCGTTAACTCGTGGAGAAGCCTTTAGGAGTCTAAATTGGTGTAAAACGTTGGGAAGTCTTATCAGCTTTAGACTCGCTGA
AGAGGAGAATATCGATAAACTCGCCTTTGGTTTGCACGACTCCTTCGCAGACTATATCTGCAACTGGATTGAACACTTAG
ATCAAAATATCTGTATTAAATCAGTCGTGATTGCAGGCAATAGCTTTGCTAATGAACTATTGGCACAAAGAGTCTCTCTA
CGCCTTGGTAAAAACTTCACCCTTAATGCTAATTCGAAGATGGATCTTGATGGTCTAAATATCGCTGCTGGTGCTTTGTA
CCTTAAACAGCGTAGACACTAA

Upstream 100 bases:

>100_bases
CTGACTCATTTTGACTCTTTAGGCTTTAGTCACCAACGTATTGCAAACATAGATATTAACAGCCTTATTCCCGACTCTTA
CAAACGTGGTTTAACTTTAG

Downstream 100 bases:

>100_bases
GCAACTGTAACTCATGACAAAAAATCTGGAAAAGAGTCGTTTACAGCTAAAGATCACCGGCATCGTTCAAGGTGTCGGTT
TTCGTCCTTTTGTATATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MKNIRFEFNCSREVPFYGHLCNQYLQNEQYDVTIGELDNLYYIEAKGEQAQLEQLADAIANDFLISAWLVKPQICAIDSP
IGTKKLLPSRPLEIEYCQHCQPQFGDNQAAHFGDVGFDCPCCQAQKRITSAEKAVSLADARALVKKLDKLGSIVLPHSNL
GAGTIISFQPIENQPREARQQLVICNPNNLHAHFSVNDNQILALSSIEKPFIKARPIRSHTRLKQPLYEICFAKSRLLLV
ICEILRQQGIDYVYIANVDNPKIAMVEAKWSLIETPATTKVLVIEATRQPLHDDAQAGNYQAKWAADHIEIIANQPCTNE
DNAIAPINSAASCALHSAVIGENKPRNIAALYFSSSSKTQIVTLDSKQNLELFFEFPSLPDNGYDIVHQLELSPQKALLD
KFKTLYPDDYLKLLSLKLAHPTNNIESLWAIAAVFLGATTQTQHNQSSSKIVPLSKTELCDFVVARAMCHKGANAPRVDF
PLTRGEAFRSLNWCKTLGSLISFRLAEEENIDKLAFGLHDSFADYICNWIEHLDQNICIKSVVIAGNSFANELLAQRVSL
RLGKNFTLNANSKMDLDGLNIAAGALYLKQRRH

Sequences:

>Translated_593_residues
MKNIRFEFNCSREVPFYGHLCNQYLQNEQYDVTIGELDNLYYIEAKGEQAQLEQLADAIANDFLISAWLVKPQICAIDSP
IGTKKLLPSRPLEIEYCQHCQPQFGDNQAAHFGDVGFDCPCCQAQKRITSAEKAVSLADARALVKKLDKLGSIVLPHSNL
GAGTIISFQPIENQPREARQQLVICNPNNLHAHFSVNDNQILALSSIEKPFIKARPIRSHTRLKQPLYEICFAKSRLLLV
ICEILRQQGIDYVYIANVDNPKIAMVEAKWSLIETPATTKVLVIEATRQPLHDDAQAGNYQAKWAADHIEIIANQPCTNE
DNAIAPINSAASCALHSAVIGENKPRNIAALYFSSSSKTQIVTLDSKQNLELFFEFPSLPDNGYDIVHQLELSPQKALLD
KFKTLYPDDYLKLLSLKLAHPTNNIESLWAIAAVFLGATTQTQHNQSSSKIVPLSKTELCDFVVARAMCHKGANAPRVDF
PLTRGEAFRSLNWCKTLGSLISFRLAEEENIDKLAFGLHDSFADYICNWIEHLDQNICIKSVVIAGNSFANELLAQRVSL
RLGKNFTLNANSKMDLDGLNIAAGALYLKQRRH
>Mature_593_residues
MKNIRFEFNCSREVPFYGHLCNQYLQNEQYDVTIGELDNLYYIEAKGEQAQLEQLADAIANDFLISAWLVKPQICAIDSP
IGTKKLLPSRPLEIEYCQHCQPQFGDNQAAHFGDVGFDCPCCQAQKRITSAEKAVSLADARALVKKLDKLGSIVLPHSNL
GAGTIISFQPIENQPREARQQLVICNPNNLHAHFSVNDNQILALSSIEKPFIKARPIRSHTRLKQPLYEICFAKSRLLLV
ICEILRQQGIDYVYIANVDNPKIAMVEAKWSLIETPATTKVLVIEATRQPLHDDAQAGNYQAKWAADHIEIIANQPCTNE
DNAIAPINSAASCALHSAVIGENKPRNIAALYFSSSSKTQIVTLDSKQNLELFFEFPSLPDNGYDIVHQLELSPQKALLD
KFKTLYPDDYLKLLSLKLAHPTNNIESLWAIAAVFLGATTQTQHNQSSSKIVPLSKTELCDFVVARAMCHKGANAPRVDF
PLTRGEAFRSLNWCKTLGSLISFRLAEEENIDKLAFGLHDSFADYICNWIEHLDQNICIKSVVIAGNSFANELLAQRVSL
RLGKNFTLNANSKMDLDGLNIAAGALYLKQRRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66215; Mature: 66215

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIRFEFNCSREVPFYGHLCNQYLQNEQYDVTIGELDNLYYIEAKGEQAQLEQLADAIA
CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHH
NDFLISAWLVKPQICAIDSPIGTKKLLPSRPLEIEYCQHCQPQFGDNQAAHFGDVGFDCP
HHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
CCQAQKRITSAEKAVSLADARALVKKLDKLGSIVLPHSNLGAGTIISFQPIENQPREARQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCHHHHC
QLVICNPNNLHAHFSVNDNQILALSSIEKPFIKARPIRSHTRLKQPLYEICFAKSRLLLV
CEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
ICEILRQQGIDYVYIANVDNPKIAMVEAKWSLIETPATTKVLVIEATRQPLHDDAQAGNY
HHHHHHHCCCCEEEEEECCCCEEEEEEECEEEEECCCCEEEEEEEECCCCCCCCCCCCCE
QAKWAADHIEIIANQPCTNEDNAIAPINSAASCALHSAVIGENKPRNIAALYFSSSSKTQ
EEEECCCEEHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEE
IVTLDSKQNLELFFEFPSLPDNGYDIVHQLELSPQKALLDKFKTLYPDDYLKLLSLKLAH
EEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
PTNNIESLWAIAAVFLGATTQTQHNQSSSKIVPLSKTELCDFVVARAMCHKGANAPRVDF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
PLTRGEAFRSLNWCKTLGSLISFRLAEEENIDKLAFGLHDSFADYICNWIEHLDQNICIK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVVIAGNSFANELLAQRVSLRLGKNFTLNANSKMDLDGLNIAAGALYLKQRRH
EEEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKNIRFEFNCSREVPFYGHLCNQYLQNEQYDVTIGELDNLYYIEAKGEQAQLEQLADAIA
CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHH
NDFLISAWLVKPQICAIDSPIGTKKLLPSRPLEIEYCQHCQPQFGDNQAAHFGDVGFDCP
HHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
CCQAQKRITSAEKAVSLADARALVKKLDKLGSIVLPHSNLGAGTIISFQPIENQPREARQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCHHHHC
QLVICNPNNLHAHFSVNDNQILALSSIEKPFIKARPIRSHTRLKQPLYEICFAKSRLLLV
CEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
ICEILRQQGIDYVYIANVDNPKIAMVEAKWSLIETPATTKVLVIEATRQPLHDDAQAGNY
HHHHHHHCCCCEEEEEECCCCEEEEEEECEEEEECCCCEEEEEEEECCCCCCCCCCCCCE
QAKWAADHIEIIANQPCTNEDNAIAPINSAASCALHSAVIGENKPRNIAALYFSSSSKTQ
EEEECCCEEHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEE
IVTLDSKQNLELFFEFPSLPDNGYDIVHQLELSPQKALLDKFKTLYPDDYLKLLSLKLAH
EEEECCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
PTNNIESLWAIAAVFLGATTQTQHNQSSSKIVPLSKTELCDFVVARAMCHKGANAPRVDF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
PLTRGEAFRSLNWCKTLGSLISFRLAEEENIDKLAFGLHDSFADYICNWIEHLDQNICIK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVVIAGNSFANELLAQRVSLRLGKNFTLNANSKMDLDGLNIAAGALYLKQRRH
EEEEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA