| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is crcB
Identifier: 167624138
GI number: 167624138
Start: 2677715
End: 2678089
Strand: Reverse
Name: crcB
Synonym: Shal_2214
Alternate gene names: 167624138
Gene position: 2678089-2677715 (Counterclockwise)
Preceding gene: 167624139
Following gene: 167624137
Centisome position: 51.24
GC content: 41.33
Gene sequence:
>375_bases ATGAATAATGTTCTTTTTGTGGCCTTAGGAGGCTCAATTGGCGCTGTTTTACGCTATCTTATCTCATTATTGATGCTTCA GGTATTTGGTAGTGGATTTCCTTTTGGTACACTGGTCGTTAATATTTTGGGTTCGTTTTTAATGGGTGTTATTTTTGCAC TCGGACAAGTGAGCGAACTTAGCCCAGAGATTAAGGCGTTTATTGGGGTTGGCATGCTAGGGGCCCTGACCACGTTTTCC ACTTTTTCCAATGAGTCTTTGCTGTTGATGCAAGAGGGGGAGTTGGTTAAAGCCGTATTGAATGTTGTTGTTAATGTTGG CGTCTGTATATTCGTCGTCTATCTAGGACAGCAATTGGTGTTTTCTCGTTTTTAA
Upstream 100 bases:
>100_bases CATCGTTTTTACTATCCAACGGAGCGTGGATTTGAAAAACGGATCAAAGACAAGCTTTCTCAACTACAGCAGCTAGATGA GCACAGTGAGGTGAAAAGAT
Downstream 100 bases:
>100_bases CTATTAAGATAATAAAATATGTTAGATCCAAAATTTTTACGTAATGAATTAGAAGTTACCGCAGAGCGTTTAGCGACTCG CGGATTTATTTTAGATGTAG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNNVLFVALGGSIGAVLRYLISLLMLQVFGSGFPFGTLVVNILGSFLMGVIFALGQVSELSPEIKAFIGVGMLGALTTFS TFSNESLLLMQEGELVKAVLNVVVNVGVCIFVVYLGQQLVFSRF
Sequences:
>Translated_124_residues MNNVLFVALGGSIGAVLRYLISLLMLQVFGSGFPFGTLVVNILGSFLMGVIFALGQVSELSPEIKAFIGVGMLGALTTFS TFSNESLLLMQEGELVKAVLNVVVNVGVCIFVVYLGQQLVFSRF >Mature_124_residues MNNVLFVALGGSIGAVLRYLISLLMLQVFGSGFPFGTLVVNILGSFLMGVIFALGQVSELSPEIKAFIGVGMLGALTTFS TFSNESLLLMQEGELVKAVLNVVVNVGVCIFVVYLGQQLVFSRF
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=104, Percent_Identity=41.3461538461538, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_SHEHH (B0TUP5)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001674432.1 - GeneID: 5906103 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_2214 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: PRK14197 - BioCyc: SHAL458817:SHAL_2214-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13213; Mature: 13213
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe54787c)-; HASH(0xf33e1c4)-; HASH(0xf39e2f8)-; HASH(0xf33e4e8)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVLFVALGGSIGAVLRYLISLLMLQVFGSGFPFGTLVVNILGSFLMGVIFALGQVSEL CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHC SPEIKAFIGVGMLGALTTFSTFSNESLLLMQEGELVKAVLNVVVNVGVCIFVVYLGQQLV CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRF HHCH >Mature Secondary Structure MNNVLFVALGGSIGAVLRYLISLLMLQVFGSGFPFGTLVVNILGSFLMGVIFALGQVSEL CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHC SPEIKAFIGVGMLGALTTFSTFSNESLLLMQEGELVKAVLNVVVNVGVCIFVVYLGQQLV CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRF HHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA