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The map label for this gene is 167624116

Identifier: 167624116

GI number: 167624116

Start: 2653289

End: 2654836

Strand: Reverse

Name: 167624116

Synonym: Shal_2192

Alternate gene names: NA

Gene position: 2654836-2653289 (Counterclockwise)

Preceding gene: 167624117

Following gene: 167624115

Centisome position: 50.79

GC content: 40.44

Gene sequence:

>1548_bases
TTGAGTAATTTAAACAAGAAACTCAGCGGTACATCACCTGTCTCCCTAAGTGCTGAACAAATTCGATTTATTAGCGGGTT
AGAGTTACCTAATCGGTTGGTTTTACCAACGAATTCTGATTTCGATACTCAATCAATTAACCCATCTTTAGATGTGTGGG
AGTTTAAATATGGCGGCAATAAAGTTAAATTTGACATGGTTTGCCCAAATCAGTTTATAACGGATTTATTGAAATATGTG
TGTGTCGTCGATTTTAACATGAGGGCTGCACCGATACGGCTCGATAGGTTTAATAATATCAAATCGTTTATATGCGACTT
AGAGCTAAGTTCTGATATTTATTTTGACTCTCTTGAAAACCTTGCAAAATCAGAGTCCTATGCTGACTCAATGAAATATT
ATGATTTAAAACGCACTTGCAGACATCTATTTCGGATGGGAATGCCACAATTCGAAATACAGGATTATGAAAAACTCGAG
GAAGTCACTATTCCATCTGTTAAGAACGCTTTTCTTATCTATCAGGACATTGAGAACTCTTTCCCGTCACATCTAAAGCG
ACTGATTGGCAAGGGATTGGTCGAGCACTCTACAGAGGAAGGATTAGCCGCCCTTACCGATGCTAAACTTACCGACCTTA
CAATCCTAGGACTGTCGTATGCTACAGGTATGCGCTCAATTCAATTTGATAAACTCCGAGGTTCCTCTTTGAGGCGTGAG
GCTCAAAACCCTCGAACGAATTTGGTCCGTTACAGTATCACTGTTCCACTTGCCAAGCAGCGTCGAGTTAACGTTGATGG
CGCTAAAATTGCTATTCCTGATTCTATTGGATTCTTGCTCGAGGAATACATGAACAGATTTAATCTTACCAAAGACAGCC
AATTATTCACAACAGACAAAGTACGTCTCGGTTCAGATTTAAATGCTAGTTTAAACAGAGGCTTGCTCTTTCTCCAGTCA
GACGAAACCAAAATGGCAATTGCCAATAAGGAACTAATCCCAGAACGTTATGTGCTCACGGATTTTAGACATAATGTTGG
GCACACAATGGCGATGAGTGGTTCAAGCGCCGAAGAAATAGCATATATTTTGGGGCATTCTTCGACGGTTGCTACGACAT
ATTACATCATGGCGACACCTGAGTTAGCCATGGTTCAACACAAAGCTTTAGGCTCCAATCCTGTCTGGATGAATATGGTA
GGTCTAATGACTACAGGGTATGCAGTCGATAAGGATACGTGGGTTGGACATACAGTTTCTGGAATGTTGAAGGGCAAGCT
ATTTATAAACATTGGTGGTTGTACTCGCAAGCAAGCTAAATGTCACTTATGCAAGGTTAGGAGCTGTTATGGATGTTTCT
ATTTTCGCCCATTCAAAAATCTAGAACCACATGAAGAAGTTTATAGAATTTTTAGCGAAGAACTTTTTGAGTTAATAGAT
GTGACAAACAAATCTGGCTACGAAAATAGTCCTATGATCCACACCGCGACGGACGCCAGACACGAGGTTAAGTTGGTTAT
AAATCGCCTTCAAGGAGGTTTGTCATGA

Upstream 100 bases:

>100_bases
ACTATGGTAGGCGATTTATCCAAAATCAGGCCAATATGTCTTTACTAAACATATTTAACAGTACGTTATACGACAACCTA
ATTGATGAGGATATTGAATT

Downstream 100 bases:

>100_bases
AGGAAATTCAAGAAAATTTGACATTATTTATTTCGGAACAAAAAAGTTATTTTGAAACAGTACTAGCCCCGAATGAAAAC
AACCTAAAATGGGGTGAAGC

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSNLNKKLSGTSPVSLSAEQIRFISGLELPNRLVLPTNSDFDTQSINPSLDVWEFKYGGNKVKFDMVCPNQFITDLLKYV
CVVDFNMRAAPIRLDRFNNIKSFICDLELSSDIYFDSLENLAKSESYADSMKYYDLKRTCRHLFRMGMPQFEIQDYEKLE
EVTIPSVKNAFLIYQDIENSFPSHLKRLIGKGLVEHSTEEGLAALTDAKLTDLTILGLSYATGMRSIQFDKLRGSSLRRE
AQNPRTNLVRYSITVPLAKQRRVNVDGAKIAIPDSIGFLLEEYMNRFNLTKDSQLFTTDKVRLGSDLNASLNRGLLFLQS
DETKMAIANKELIPERYVLTDFRHNVGHTMAMSGSSAEEIAYILGHSSTVATTYYIMATPELAMVQHKALGSNPVWMNMV
GLMTTGYAVDKDTWVGHTVSGMLKGKLFINIGGCTRKQAKCHLCKVRSCYGCFYFRPFKNLEPHEEVYRIFSEELFELID
VTNKSGYENSPMIHTATDARHEVKLVINRLQGGLS

Sequences:

>Translated_515_residues
MSNLNKKLSGTSPVSLSAEQIRFISGLELPNRLVLPTNSDFDTQSINPSLDVWEFKYGGNKVKFDMVCPNQFITDLLKYV
CVVDFNMRAAPIRLDRFNNIKSFICDLELSSDIYFDSLENLAKSESYADSMKYYDLKRTCRHLFRMGMPQFEIQDYEKLE
EVTIPSVKNAFLIYQDIENSFPSHLKRLIGKGLVEHSTEEGLAALTDAKLTDLTILGLSYATGMRSIQFDKLRGSSLRRE
AQNPRTNLVRYSITVPLAKQRRVNVDGAKIAIPDSIGFLLEEYMNRFNLTKDSQLFTTDKVRLGSDLNASLNRGLLFLQS
DETKMAIANKELIPERYVLTDFRHNVGHTMAMSGSSAEEIAYILGHSSTVATTYYIMATPELAMVQHKALGSNPVWMNMV
GLMTTGYAVDKDTWVGHTVSGMLKGKLFINIGGCTRKQAKCHLCKVRSCYGCFYFRPFKNLEPHEEVYRIFSEELFELID
VTNKSGYENSPMIHTATDARHEVKLVINRLQGGLS
>Mature_514_residues
SNLNKKLSGTSPVSLSAEQIRFISGLELPNRLVLPTNSDFDTQSINPSLDVWEFKYGGNKVKFDMVCPNQFITDLLKYVC
VVDFNMRAAPIRLDRFNNIKSFICDLELSSDIYFDSLENLAKSESYADSMKYYDLKRTCRHLFRMGMPQFEIQDYEKLEE
VTIPSVKNAFLIYQDIENSFPSHLKRLIGKGLVEHSTEEGLAALTDAKLTDLTILGLSYATGMRSIQFDKLRGSSLRREA
QNPRTNLVRYSITVPLAKQRRVNVDGAKIAIPDSIGFLLEEYMNRFNLTKDSQLFTTDKVRLGSDLNASLNRGLLFLQSD
ETKMAIANKELIPERYVLTDFRHNVGHTMAMSGSSAEEIAYILGHSSTVATTYYIMATPELAMVQHKALGSNPVWMNMVG
LMTTGYAVDKDTWVGHTVSGMLKGKLFINIGGCTRKQAKCHLCKVRSCYGCFYFRPFKNLEPHEEVYRIFSEELFELIDV
TNKSGYENSPMIHTATDARHEVKLVINRLQGGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58319; Mature: 58188

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLNKKLSGTSPVSLSAEQIRFISGLELPNRLVLPTNSDFDTQSINPSLDVWEFKYGGN
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCC
KVKFDMVCPNQFITDLLKYVCVVDFNMRAAPIRLDRFNNIKSFICDLELSSDIYFDSLEN
EEEEEEECCHHHHHHHHHHHHEECCCCCCCCEEHHHHHCHHHHEEEEECCCCCHHHHHHH
LAKSESYADSMKYYDLKRTCRHLFRMGMPQFEIQDYEKLEEVTIPSVKNAFLIYQDIENS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHH
FPSHLKRLIGKGLVEHSTEEGLAALTDAKLTDLTILGLSYATGMRSIQFDKLRGSSLRRE
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEEEEEEEHHHCCCCCEEEHHHCCHHHHHH
AQNPRTNLVRYSITVPLAKQRRVNVDGAKIAIPDSIGFLLEEYMNRFNLTKDSQLFTTDK
HCCCCCCEEEEEEEECCCCCCEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEECC
VRLGSDLNASLNRGLLFLQSDETKMAIANKELIPERYVLTDFRHNVGHTMAMSGSSAEEI
EECCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHHHHHCCCCEEEECCCCHHHE
AYILGHSSTVATTYYIMATPELAMVQHKALGSNPVWMNMVGLMTTGYAVDKDTWVGHTVS
EHHHCCCCEEEEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCCHH
GMLKGKLFINIGGCTRKQAKCHLCKVRSCYGCFYFRPFKNLEPHEEVYRIFSEELFELID
HEEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VTNKSGYENSPMIHTATDARHEVKLVINRLQGGLS
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNLNKKLSGTSPVSLSAEQIRFISGLELPNRLVLPTNSDFDTQSINPSLDVWEFKYGGN
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCC
KVKFDMVCPNQFITDLLKYVCVVDFNMRAAPIRLDRFNNIKSFICDLELSSDIYFDSLEN
EEEEEEECCHHHHHHHHHHHHEECCCCCCCCEEHHHHHCHHHHEEEEECCCCCHHHHHHH
LAKSESYADSMKYYDLKRTCRHLFRMGMPQFEIQDYEKLEEVTIPSVKNAFLIYQDIENS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHH
FPSHLKRLIGKGLVEHSTEEGLAALTDAKLTDLTILGLSYATGMRSIQFDKLRGSSLRRE
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHEEEEEEEHHHCCCCCEEEHHHCCHHHHHH
AQNPRTNLVRYSITVPLAKQRRVNVDGAKIAIPDSIGFLLEEYMNRFNLTKDSQLFTTDK
HCCCCCCEEEEEEEECCCCCCEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEECC
VRLGSDLNASLNRGLLFLQSDETKMAIANKELIPERYVLTDFRHNVGHTMAMSGSSAEEI
EECCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHHHHHCCCCEEEECCCCHHHE
AYILGHSSTVATTYYIMATPELAMVQHKALGSNPVWMNMVGLMTTGYAVDKDTWVGHTVS
EHHHCCCCEEEEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCCHH
GMLKGKLFINIGGCTRKQAKCHLCKVRSCYGCFYFRPFKNLEPHEEVYRIFSEELFELID
HEEEEEEEEEECCCCCCCCHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VTNKSGYENSPMIHTATDARHEVKLVINRLQGGLS
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA