Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624115

Identifier: 167624115

GI number: 167624115

Start: 2650866

End: 2653292

Strand: Reverse

Name: 167624115

Synonym: Shal_2191

Alternate gene names: NA

Gene position: 2653292-2650866 (Counterclockwise)

Preceding gene: 167624116

Following gene: 167624114

Centisome position: 50.76

GC content: 38.07

Gene sequence:

>2427_bases
ATGAAGGAAATTCAAGAAAATTTGACATTATTTATTTCGGAACAAAAAAGTTATTTTGAAACAGTACTAGCCCCGAATGA
AAACAACCTAAAATGGGGTGAAGCATGGATATATAATAGGTCAAGTAAGGGGTTTCTTATTGGCCCTACCAACGCAGGTG
TTAACTTTAAGGAAATCCTTATTACTCGCTCGAAAGCTTTGTTCCGAGAGGATGAAAGCTACGAACATATCGTTATCGAG
GATGGTAAAACCATTCTAATTGATACGCTGTTTTCTGATTTTACTCAGGCATTTTTAGTTTATAAGCTTAGACAATCTGG
CAAGTACCCTAGCGCAGCAAGTCTGGTTGCCCCTTCCCTACTTTTAAAGCGCATTTATGTTCGTTTGTTAATGTCAGGAG
TCAAACCATCGCCTTGCAATATATCGTCAGAAACACTTAATGATACTGCTGAATTGCTGGCTACGTTTCGCAAACAAAGT
ACATTAGCGGACGATCAAACCTATTTAAACGGTATTGCGGAAGTCCTTCGCAAAAAACAAATTACCTATAGCGAACCTGA
GTTTATGGTTACGGTTAAACGTCCTCAACGAGCAAGTACCAAGAAGGTTAGAGAGGCTGAATTTGCTGAGGGGCTTGGGG
ATGAGGAAAATGAAAAGCTAGTTGAGATCCAGGATTTTCTTAATGTTGTAAGTCTTCGAAATCTTGTCCAAAAGGATAGC
GAAAAAATAATGTTGAATATGACATTGTTATTATTTGTTACAGCTTGGCGATTTGAAGAATTATCCGGCATAACCATTAA
TGCATTGAAAAGGCTAGAAGTTGAAGATGAACAAGTTCGTAAGTTACTTAAAAAACGTGGCTTGCATACCTATTATCTAG
GTATCGTTTATCAGGGAAAAAAAGGTGCTGGAATGCGTACTCACTGGGTTGAGCCCCTTGCAATAGATTTGGTTGAATTC
ATTTTCAAGGATACTATAAAGCTAACAAAAAATTTAAGAAATCAGGTTGTTAATTGTCGTGGTAATAACTTTAAAACACT
ACTCCCTCAAGAGCTAGTCCCTAAAGAATCAACCGTTGTTAATCTAAATGAAGCAGAAATTGAGTTAGCAGATGTAGTTG
CACACATTTATGAGTCCACCTCGGATAGTATTAGGTATTTTAATGATTTAAAGCGTTTTGCTAAAGAAAAACTAAGAAAA
GCTGGCTTTTTACCTCATCGAATCGTTAAAAATCGCAGAAAACGCGAAGATCAATTTTATACGCTTAAACAAATTGATGA
TTTTTTAAAGCAGACCATAACTAAATCTAAAGAGCTTTCCGCAGACATGATTTACCGTGTGCGGGACTCTTCAAATGACT
ACTCCTACGATGTCGAATACGAAAAACTTTTATTCATTACGCCAGTAGGATCTACTGCATTAAATTACTCTGGCATGATC
AAGCCATTAGCAACACCAATTTGGTATCGATATTTATCTGCATATTTGGGAATGGGTATTAACCGCAACACATCTATTTT
TACTCGTTATAATCTAAAAACAAAAAATGGCGAATTCACCAAGATTAATACCCATATGCCCCGCCATAATAAAAACACCT
TCTTAGCAATAGCAGATGTCTCTGAACATCTACAGGCTATGGTCATGGGTCGTGCTGACATCAAACAAAACGAAAGATAC
CAGCATCTTGCGATTGAAGAACTAGCATTAACTACGGACATAGTTTCTTACCATCAGGACAATTCCTGTACTGCTATCTC
ATTGAGTCCAACTGGCGTTGATCAGGTAAAAAACACTGGTATCATTGGCTTAAATCCTGACCTTAAACTTGAAAACGCGC
TAGCGCAAAACCTACATACATTTACAACAGAGCGCGACAGAACTTCGTTCATCACTGATATGCTTGATGATATTGATCTG
AATATCTTTGAAGAGTTTTCGGATGAACTTGCTGCATTTCAAAACGATAATGAGAAGAGGGATATTATTCGAGCACACTC
AGACCTATCCCCATTGGCCTTCGGTAGCTGTATGCGCAAAATTTCTGTAATCGAGTGTCCCTTTAATATTATGTGTCAAG
ATGGTACCGCCTGCCCGTACCATACTCTAACAGGACGTGCTGATGAGGCTGACAAGGTAGCGTCTTTATTAAAGAGTATT
GAATCCGAAATCGAGAAGATCAACTATTTAGAAATCATAGCACGCGACGAGGCGGACGAACTCCTAGAGGTTTTAAACGC
TCGGAAAGAGAATGTTAAAATGCTGAGTGAACAAAGTCAGTCCTTTGAAGCTAAAAAAATACCAGTTAATCTACAGGAAT
ATGATGCCAAAAAGAAACCAATTCGGTTAGCGACGTTATTTGCAGTTGAGCATCGAACTAATGAAAAAAGAGCTGTGTTA
GAAAAGCTGTCAAAGCCTAGTGAGTAA

Upstream 100 bases:

>100_bases
CAAACAAATCTGGCTACGAAAATAGTCCTATGATCCACACCGCGACGGACGCCAGACACGAGGTTAAGTTGGTTATAAAT
CGCCTTCAAGGAGGTTTGTC

Downstream 100 bases:

>100_bases
CTAAACTAACGACTAAACAGCAGAAGTAATCTTATATATTGTGTTAGGGAAACGTAGTATTTCCAACACAATTTACTGGA
AATTAAAAATGAGGAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MKEIQENLTLFISEQKSYFETVLAPNENNLKWGEAWIYNRSSKGFLIGPTNAGVNFKEILITRSKALFREDESYEHIVIE
DGKTILIDTLFSDFTQAFLVYKLRQSGKYPSAASLVAPSLLLKRIYVRLLMSGVKPSPCNISSETLNDTAELLATFRKQS
TLADDQTYLNGIAEVLRKKQITYSEPEFMVTVKRPQRASTKKVREAEFAEGLGDEENEKLVEIQDFLNVVSLRNLVQKDS
EKIMLNMTLLLFVTAWRFEELSGITINALKRLEVEDEQVRKLLKKRGLHTYYLGIVYQGKKGAGMRTHWVEPLAIDLVEF
IFKDTIKLTKNLRNQVVNCRGNNFKTLLPQELVPKESTVVNLNEAEIELADVVAHIYESTSDSIRYFNDLKRFAKEKLRK
AGFLPHRIVKNRRKREDQFYTLKQIDDFLKQTITKSKELSADMIYRVRDSSNDYSYDVEYEKLLFITPVGSTALNYSGMI
KPLATPIWYRYLSAYLGMGINRNTSIFTRYNLKTKNGEFTKINTHMPRHNKNTFLAIADVSEHLQAMVMGRADIKQNERY
QHLAIEELALTTDIVSYHQDNSCTAISLSPTGVDQVKNTGIIGLNPDLKLENALAQNLHTFTTERDRTSFITDMLDDIDL
NIFEEFSDELAAFQNDNEKRDIIRAHSDLSPLAFGSCMRKISVIECPFNIMCQDGTACPYHTLTGRADEADKVASLLKSI
ESEIEKINYLEIIARDEADELLEVLNARKENVKMLSEQSQSFEAKKIPVNLQEYDAKKKPIRLATLFAVEHRTNEKRAVL
EKLSKPSE

Sequences:

>Translated_808_residues
MKEIQENLTLFISEQKSYFETVLAPNENNLKWGEAWIYNRSSKGFLIGPTNAGVNFKEILITRSKALFREDESYEHIVIE
DGKTILIDTLFSDFTQAFLVYKLRQSGKYPSAASLVAPSLLLKRIYVRLLMSGVKPSPCNISSETLNDTAELLATFRKQS
TLADDQTYLNGIAEVLRKKQITYSEPEFMVTVKRPQRASTKKVREAEFAEGLGDEENEKLVEIQDFLNVVSLRNLVQKDS
EKIMLNMTLLLFVTAWRFEELSGITINALKRLEVEDEQVRKLLKKRGLHTYYLGIVYQGKKGAGMRTHWVEPLAIDLVEF
IFKDTIKLTKNLRNQVVNCRGNNFKTLLPQELVPKESTVVNLNEAEIELADVVAHIYESTSDSIRYFNDLKRFAKEKLRK
AGFLPHRIVKNRRKREDQFYTLKQIDDFLKQTITKSKELSADMIYRVRDSSNDYSYDVEYEKLLFITPVGSTALNYSGMI
KPLATPIWYRYLSAYLGMGINRNTSIFTRYNLKTKNGEFTKINTHMPRHNKNTFLAIADVSEHLQAMVMGRADIKQNERY
QHLAIEELALTTDIVSYHQDNSCTAISLSPTGVDQVKNTGIIGLNPDLKLENALAQNLHTFTTERDRTSFITDMLDDIDL
NIFEEFSDELAAFQNDNEKRDIIRAHSDLSPLAFGSCMRKISVIECPFNIMCQDGTACPYHTLTGRADEADKVASLLKSI
ESEIEKINYLEIIARDEADELLEVLNARKENVKMLSEQSQSFEAKKIPVNLQEYDAKKKPIRLATLFAVEHRTNEKRAVL
EKLSKPSE
>Mature_808_residues
MKEIQENLTLFISEQKSYFETVLAPNENNLKWGEAWIYNRSSKGFLIGPTNAGVNFKEILITRSKALFREDESYEHIVIE
DGKTILIDTLFSDFTQAFLVYKLRQSGKYPSAASLVAPSLLLKRIYVRLLMSGVKPSPCNISSETLNDTAELLATFRKQS
TLADDQTYLNGIAEVLRKKQITYSEPEFMVTVKRPQRASTKKVREAEFAEGLGDEENEKLVEIQDFLNVVSLRNLVQKDS
EKIMLNMTLLLFVTAWRFEELSGITINALKRLEVEDEQVRKLLKKRGLHTYYLGIVYQGKKGAGMRTHWVEPLAIDLVEF
IFKDTIKLTKNLRNQVVNCRGNNFKTLLPQELVPKESTVVNLNEAEIELADVVAHIYESTSDSIRYFNDLKRFAKEKLRK
AGFLPHRIVKNRRKREDQFYTLKQIDDFLKQTITKSKELSADMIYRVRDSSNDYSYDVEYEKLLFITPVGSTALNYSGMI
KPLATPIWYRYLSAYLGMGINRNTSIFTRYNLKTKNGEFTKINTHMPRHNKNTFLAIADVSEHLQAMVMGRADIKQNERY
QHLAIEELALTTDIVSYHQDNSCTAISLSPTGVDQVKNTGIIGLNPDLKLENALAQNLHTFTTERDRTSFITDMLDDIDL
NIFEEFSDELAAFQNDNEKRDIIRAHSDLSPLAFGSCMRKISVIECPFNIMCQDGTACPYHTLTGRADEADKVASLLKSI
ESEIEKINYLEIIARDEADELLEVLNARKENVKMLSEQSQSFEAKKIPVNLQEYDAKKKPIRLATLFAVEHRTNEKRAVL
EKLSKPSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92616; Mature: 92616

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIQENLTLFISEQKSYFETVLAPNENNLKWGEAWIYNRSSKGFLIGPTNAGVNFKEIL
CCCHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHH
ITRSKALFREDESYEHIVIEDGKTILIDTLFSDFTQAFLVYKLRQSGKYPSAASLVAPSL
HHHHHHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLKRIYVRLLMSGVKPSPCNISSETLNDTAELLATFRKQSTLADDQTYLNGIAEVLRKKQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
ITYSEPEFMVTVKRPQRASTKKVREAEFAEGLGDEENEKLVEIQDFLNVVSLRNLVQKDS
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
EKIMLNMTLLLFVTAWRFEELSGITINALKRLEVEDEQVRKLLKKRGLHTYYLGIVYQGK
CCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEEEECC
KGAGMRTHWVEPLAIDLVEFIFKDTIKLTKNLRNQVVNCRGNNFKTLLPQELVPKESTVV
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCEEE
NLNEAEIELADVVAHIYESTSDSIRYFNDLKRFAKEKLRKAGFLPHRIVKNRRKREDQFY
ECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
TLKQIDDFLKQTITKSKELSADMIYRVRDSSNDYSYDVEYEKLLFITPVGSTALNYSGMI
EHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCEEEEEEEEEEEEEECCCHHCCCCCCH
KPLATPIWYRYLSAYLGMGINRNTSIFTRYNLKTKNGEFTKINTHMPRHNKNTFLAIADV
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECH
SEHLQAMVMGRADIKQNERYQHLAIEELALTTDIVSYHQDNSCTAISLSPTGVDQVKNTG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCC
IIGLNPDLKLENALAQNLHTFTTERDRTSFITDMLDDIDLNIFEEFSDELAAFQNDNEKR
EEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
DIIRAHSDLSPLAFGSCMRKISVIECPFNIMCQDGTACPYHTLTGRADEADKVASLLKSI
HHHHHCCCCCHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
ESEIEKINYLEIIARDEADELLEVLNARKENVKMLSEQSQSFEAKKIPVNLQEYDAKKKP
HHHHHHCCHHHEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC
IRLATLFAVEHRTNEKRAVLEKLSKPSE
EEEEEEEEHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKEIQENLTLFISEQKSYFETVLAPNENNLKWGEAWIYNRSSKGFLIGPTNAGVNFKEIL
CCCHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHH
ITRSKALFREDESYEHIVIEDGKTILIDTLFSDFTQAFLVYKLRQSGKYPSAASLVAPSL
HHHHHHHHCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLKRIYVRLLMSGVKPSPCNISSETLNDTAELLATFRKQSTLADDQTYLNGIAEVLRKKQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
ITYSEPEFMVTVKRPQRASTKKVREAEFAEGLGDEENEKLVEIQDFLNVVSLRNLVQKDS
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
EKIMLNMTLLLFVTAWRFEELSGITINALKRLEVEDEQVRKLLKKRGLHTYYLGIVYQGK
CCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEEEECC
KGAGMRTHWVEPLAIDLVEFIFKDTIKLTKNLRNQVVNCRGNNFKTLLPQELVPKESTVV
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCEEE
NLNEAEIELADVVAHIYESTSDSIRYFNDLKRFAKEKLRKAGFLPHRIVKNRRKREDQFY
ECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
TLKQIDDFLKQTITKSKELSADMIYRVRDSSNDYSYDVEYEKLLFITPVGSTALNYSGMI
EHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCEEEEEEEEEEEEEECCCHHCCCCCCH
KPLATPIWYRYLSAYLGMGINRNTSIFTRYNLKTKNGEFTKINTHMPRHNKNTFLAIADV
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECH
SEHLQAMVMGRADIKQNERYQHLAIEELALTTDIVSYHQDNSCTAISLSPTGVDQVKNTG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCC
IIGLNPDLKLENALAQNLHTFTTERDRTSFITDMLDDIDLNIFEEFSDELAAFQNDNEKR
EEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
DIIRAHSDLSPLAFGSCMRKISVIECPFNIMCQDGTACPYHTLTGRADEADKVASLLKSI
HHHHHCCCCCHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
ESEIEKINYLEIIARDEADELLEVLNARKENVKMLSEQSQSFEAKKIPVNLQEYDAKKKP
HHHHHHCCHHHEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC
IRLATLFAVEHRTNEKRAVLEKLSKPSE
EEEEEEEEHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA