| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yecA [C]
Identifier: 167624074
GI number: 167624074
Start: 2592531
End: 2592866
Strand: Reverse
Name: yecA [C]
Synonym: Shal_2150
Alternate gene names: 167624074
Gene position: 2592866-2592531 (Counterclockwise)
Preceding gene: 167624076
Following gene: 167624073
Centisome position: 49.61
GC content: 42.56
Gene sequence:
>336_bases ATGTCAGACAAATTCTTTTTTAAAGGGCGTAAAACCCCAAAGCCTAAGCACGAAAGCTATGGTTACAACACTAAACGCGA AGTTAAAATCGGCACTGAAGTAAACCCTTTAACACTTCTGGTTCAAAACGCCGAGCGTGAAGCAGAGATCTTGCAGTTAC TTAGTGATAATGAGCTGGTGGGCTTAATCACGGTTGATGAAACCCAAGAAGAGAACGTGGTTCAATTGATGGGCCTTCTC AATAAACCACAGACAACTCGCTTTGAAAAAACACCGAATCGTAACGACCCTTGTGTTTGCGGTAGCGGTCAGAAATATAA GAAATGCTGCGGTTAA
Upstream 100 bases:
>100_bases ATAAAATAGCCTTCTAGGTTAGACTTCGATACCACTGAGTGCATTTTTATAGTATAAGCTTGCGTAAATTTATGTTTTAT CAATATTGAGCGCCATAGCC
Downstream 100 bases:
>100_bases CATCGTAAAATTACAAGCAGTACATATAGTACTGCTTTTTTTTGTCTGTCGTTTCCAGCTTATCTCTATTCTACTTAACT CTACTTCACCCACCTCATTC
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; ATPase; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDKFFFKGRKTPKPKHESYGYNTKREVKIGTEVNPLTLLVQNAEREAEILQLLSDNELVGLITVDETQEENVVQLMGLL NKPQTTRFEKTPNRNDPCVCGSGQKYKKCCG
Sequences:
>Translated_111_residues MSDKFFFKGRKTPKPKHESYGYNTKREVKIGTEVNPLTLLVQNAEREAEILQLLSDNELVGLITVDETQEENVVQLMGLL NKPQTTRFEKTPNRNDPCVCGSGQKYKKCCG >Mature_110_residues SDKFFFKGRKTPKPKHESYGYNTKREVKIGTEVNPLTLLVQNAEREAEILQLLSDNELVGLITVDETQEENVVQLMGLLN KPQTTRFEKTPNRNDPCVCGSGQKYKKCCG
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12607; Mature: 12475
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFFFKGRKTPKPKHESYGYNTKREVKIGTEVNPLTLLVQNAEREAEILQLLSDNELV CCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCCEE GLITVDETQEENVVQLMGLLNKPQTTRFEKTPNRNDPCVCGSGQKYKKCCG EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHCC >Mature Secondary Structure SDKFFFKGRKTPKPKHESYGYNTKREVKIGTEVNPLTLLVQNAEREAEILQLLSDNELV CCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCCEE GLITVDETQEENVVQLMGLLNKPQTTRFEKTPNRNDPCVCGSGQKYKKCCG EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA