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The map label for this gene is mtrC [H]

Identifier: 167624073

GI number: 167624073

Start: 2590837

End: 2592030

Strand: Reverse

Name: mtrC [H]

Synonym: Shal_2149

Alternate gene names: 167624073

Gene position: 2592030-2590837 (Counterclockwise)

Preceding gene: 167624074

Following gene: 167624072

Centisome position: 49.59

GC content: 46.98

Gene sequence:

>1194_bases
GTGGCTACTAAAAAACAGATCATTTTACCAATGGTTGTCATTGCCGTTGGCGTGGCAGGGTTTATTGGCATGTCGGCATT
AAAAAAGCCCCCGGAAGAGAAGGAGGAGATCGATACGACTCCTCTAGTATCGATTCAGTCTGTAGAGATCAACCCGATGA
GCTTTGCCGTTACCTCATATGGTGTGGTGAACGCCAAGTATGAAACTGAGTTAGTCTCACAACTGAATGGTGAAATTGTT
TTTCTCTCGGACAAGTTCGTTCGCGGCGGCTTTGTAAAAAAAGGCGATGTCCTCGCAAAAATCGATCCCAGTGATTATGA
AGCAGCACTTATAGATGCTAAAGCGAATATGGCATCAGCCAGAGCGACGCTGGTACAAGAGAAAGCATTCGGTAAAGTCG
CCGAGGCAGAATGGAAGCGGATTGAAAATGGTGTCCCCACTGAACTGAGTCTGCGTAAACCGCAGCTTGCCCAAGAAGTG
GCCAAGCTAAACTCTTCAGAGGCAGGGCTAAAGCGTGCTATTCGCAACCTTGAACGTACCATTATCAAAGCGCCTTTTGA
TGCATTAATTGAGGCGCGCAATATAGGATTAGGCTCCTATGTCAGCATGGGCACCCCCCTTGGCAAAGTCTTGAGTACCG
CTCATGCCGAAGTTCGCTTACCGATTGCCGACAAAGAGCTGCAGTTCTTAGATAACAAAGGCAAAGGCGCGGAAGTGATG
TTAACCGGTGAGCTTGCTGGACAAACAAAACAGTGGCCGGCAAGGATTGTAAGGAGCGAGGGCGTGATTGATAGTCGTAG
TCGTATGACCTATTTAGTCGCTGAGGTTACCGATCCTTACGGACTTAACGCTAACAATAATGAGCTGCGCTATGGCACCT
ATGTTACTGCAAGTATTGATGGCTCTCATGCGGGACAAGTAGCAGAAATTCCACGTCATTTGGTTATCAACAATCAGGTC
GCCACACTCGATGAGGGTGGAAAGCTTAGATATAAAGATATCACTATTCTACGCCAGATAGGCTCTAAGGTTATTGTTTC
TGCCGGGTTAGAAGCGGGAATGAATGTCATCACCTCAGCGCTTGATTACCCGATTGAAGGTATGCAACTCGCCTTACCGG
AAGATAAAGCCTTATCAGAAGATGAACAAACCGATCCACAAGCTACCCAGATAGCGATGGAAGATAAGGAATAA

Upstream 100 bases:

>100_bases
TGTATTCAAAATACTAATTCGATTACTCATCTTTATTGTATAAAAAGCAGTAAAAAATGAAGTATTGAGCACTAAATTGC
TTCAACAAGAGGACGTGTTT

Downstream 100 bases:

>100_bases
TTCATGACTGATACCAATAAAGGCATTATTGCTTGGTTCGCACGCAACAGCGTAGCGGCTAACCTATTGATGATTATCAT
CATCATAGGTGGATTACTCA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MATKKQIILPMVVIAVGVAGFIGMSALKKPPEEKEEIDTTPLVSIQSVEINPMSFAVTSYGVVNAKYETELVSQLNGEIV
FLSDKFVRGGFVKKGDVLAKIDPSDYEAALIDAKANMASARATLVQEKAFGKVAEAEWKRIENGVPTELSLRKPQLAQEV
AKLNSSEAGLKRAIRNLERTIIKAPFDALIEARNIGLGSYVSMGTPLGKVLSTAHAEVRLPIADKELQFLDNKGKGAEVM
LTGELAGQTKQWPARIVRSEGVIDSRSRMTYLVAEVTDPYGLNANNNELRYGTYVTASIDGSHAGQVAEIPRHLVINNQV
ATLDEGGKLRYKDITILRQIGSKVIVSAGLEAGMNVITSALDYPIEGMQLALPEDKALSEDEQTDPQATQIAMEDKE

Sequences:

>Translated_397_residues
MATKKQIILPMVVIAVGVAGFIGMSALKKPPEEKEEIDTTPLVSIQSVEINPMSFAVTSYGVVNAKYETELVSQLNGEIV
FLSDKFVRGGFVKKGDVLAKIDPSDYEAALIDAKANMASARATLVQEKAFGKVAEAEWKRIENGVPTELSLRKPQLAQEV
AKLNSSEAGLKRAIRNLERTIIKAPFDALIEARNIGLGSYVSMGTPLGKVLSTAHAEVRLPIADKELQFLDNKGKGAEVM
LTGELAGQTKQWPARIVRSEGVIDSRSRMTYLVAEVTDPYGLNANNNELRYGTYVTASIDGSHAGQVAEIPRHLVINNQV
ATLDEGGKLRYKDITILRQIGSKVIVSAGLEAGMNVITSALDYPIEGMQLALPEDKALSEDEQTDPQATQIAMEDKE
>Mature_396_residues
ATKKQIILPMVVIAVGVAGFIGMSALKKPPEEKEEIDTTPLVSIQSVEINPMSFAVTSYGVVNAKYETELVSQLNGEIVF
LSDKFVRGGFVKKGDVLAKIDPSDYEAALIDAKANMASARATLVQEKAFGKVAEAEWKRIENGVPTELSLRKPQLAQEVA
KLNSSEAGLKRAIRNLERTIIKAPFDALIEARNIGLGSYVSMGTPLGKVLSTAHAEVRLPIADKELQFLDNKGKGAEVML
TGELAGQTKQWPARIVRSEGVIDSRSRMTYLVAEVTDPYGLNANNNELRYGTYVTASIDGSHAGQVAEIPRHLVINNQVA
TLDEGGKLRYKDITILRQIGSKVIVSAGLEAGMNVITSALDYPIEGMQLALPEDKALSEDEQTDPQATQIAMEDKE

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=380, Percent_Identity=23.4210526315789, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43010; Mature: 42879

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKKQIILPMVVIAVGVAGFIGMSALKKPPEEKEEIDTTPLVSIQSVEINPMSFAVTSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEECCEEEEEEEC
GVVNAKYETELVSQLNGEIVFLSDKFVRGGFVKKGDVLAKIDPSDYEAALIDAKANMASA
CEEECHHHHHHHHHHCCCEEEEECCHHCCCCEECCCEEEEECCCCCCEEEEECCCHHHHH
RATLVQEKAFGKVAEAEWKRIENGVPTELSLRKPQLAQEVAKLNSSEAGLKRAIRNLERT
HHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
IIKAPFDALIEARNIGLGSYVSMGTPLGKVLSTAHAEVRLPIADKELQFLDNKGKGAEVM
HHHCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEEE
LTGELAGQTKQWPARIVRSEGVIDSRSRMTYLVAEVTDPYGLNANNNELRYGTYVTASID
EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECC
GSHAGQVAEIPRHLVINNQVATLDEGGKLRYKDITILRQIGSKVIVSAGLEAGMNVITSA
CCCCCCHHHCCCEEEECCCEEEECCCCCEEEHHHHHHHHHCCHHEEHHCHHHHHHHHHHH
LDYPIEGMQLALPEDKALSEDEQTDPQATQIAMEDKE
HCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
ATKKQIILPMVVIAVGVAGFIGMSALKKPPEEKEEIDTTPLVSIQSVEINPMSFAVTSY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEECCEEEEEEEC
GVVNAKYETELVSQLNGEIVFLSDKFVRGGFVKKGDVLAKIDPSDYEAALIDAKANMASA
CEEECHHHHHHHHHHCCCEEEEECCHHCCCCEECCCEEEEECCCCCCEEEEECCCHHHHH
RATLVQEKAFGKVAEAEWKRIENGVPTELSLRKPQLAQEVAKLNSSEAGLKRAIRNLERT
HHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
IIKAPFDALIEARNIGLGSYVSMGTPLGKVLSTAHAEVRLPIADKELQFLDNKGKGAEVM
HHHCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEEE
LTGELAGQTKQWPARIVRSEGVIDSRSRMTYLVAEVTDPYGLNANNNELRYGTYVTASID
EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECC
GSHAGQVAEIPRHLVINNQVATLDEGGKLRYKDITILRQIGSKVIVSAGLEAGMNVITSA
CCCCCCHHHCCCEEEECCCEEEECCCCCEEEHHHHHHHHHCCHHEEHHCHHHHHHHHHHH
LDYPIEGMQLALPEDKALSEDEQTDPQATQIAMEDKE
HCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]