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The map label for this gene is yjjL [H]

Identifier: 167624018

GI number: 167624018

Start: 2520235

End: 2521620

Strand: Reverse

Name: yjjL [H]

Synonym: Shal_2094

Alternate gene names: 167624018

Gene position: 2521620-2520235 (Counterclockwise)

Preceding gene: 167624023

Following gene: 167624017

Centisome position: 48.24

GC content: 44.88

Gene sequence:

>1386_bases
ATGGGGCCGACTTCACCTTCAGTGACATGGCGTACACATAGCACACTTGTTTTGCTAGCACTGGTTTACGTCTTCTCTTT
TATTGATAGGAATGTCATTGCCATTGTTTTGGAGCCAATAAAACAAGAGTTTGGCATTTCAGATACCTTAATGGGTTTCC
TTAGTGGGCTCGCATTTGCCATTTTATATGCAGGATTAAGTCTACCTCTCAGTCGGTTAGCCGATAGAGGTGGAAATAGA
CGCAATATTGTCGCCGTATGTTGTGGGCTTTGGAGTATTGCGACAATGGCCTGCGGTATGGCGCAGCACTTCTGGCAATT
ATTGCTTGCCAGAATGACTGTTGCTGTCGGTGAGGCTGGCGGTATCGCGCCATCGATATCGATGGTGTCAGATCTCTATC
CTCCCCATCGTCGCTCCTTGGCTATTAGCGTACTAATGATTGGTCCTCATCTTGGGTTATTAGCAGCCATGGTTGCGGGT
GGCTGGATAGCACAAGAATATGGATGGCGCTCAGTTTTCTTATTCTTTGGCGCTCCCGGAATTTTACTAGCCTTGCTGTT
ATTTTGTTTTACTAAAGATCCTGGCCATGGTGTTTACGATAAGTATACAGCGTCCAAAAATAAAAAAGTTAAGCAAGAAT
CCTTCTTCAAGCAGCTAAATGGAATTATGAAAGTTAAAGGCTTCATTTGGATCGCAATGGGTTGTGCACTAGCTGGTATG
GCTGGATATGGTTACGGCATATGGGTACCTACGTTTATGGTTCGTAACTACGATATGTCCCTCGCTCATGCCGGAATAAG
CTTTGGATTAGCCGGTGGTATTTTTGCTGCTATAGGGACCATATTTAGTGGTTTATTTTGTGATAAATTGTCAAAGCGAG
ATTCACGCTGGCAAATTGGACTACCCATTATTGGCATTTTAATCAGTTTACCAATGGGCGTTGCATTCATGCTGTGGCCA
GCTGATGCCTTTTGGATGATAGGCGAAATAAAAATTCCTCATGCCATCGTCTTTGCTGCGTTATTTAGTTTCTTCAATTG
CTGGTGGCCAAGTTTATCTTATGCCGCAATCAGTCATTTAATGACCAGTAGCCAACGTGCAACAGGCGCTGCATCGCTAA
ACCTATTCTTAACCCTTTTCGGAGCAGGCCTCGGCCCTCTGCTGACAGGCACATTAAGTGACGTGTTTGGGGCAACATTC
GCAGGTGAAGGACTAAAGTACGCTTTGGTCGCGACTATGATGTTACTCCTCGTTTCAGCATGGTTTTACTATAAAGGCCT
CTCCCCTTACCAAACTCGAATGAAACAATTGGATAACGATGAAGTTGAAGCTGTAGAAAACGCAGTGCCGCCTACTACCA
TCAACGATCCGCTACCGAGTTCATAG

Upstream 100 bases:

>100_bases
GAATCTATTACACGACTAAACAACACGTCCATAAGGACGATGTTTAGATTTTTACCTAGGTTACCTTTTAGCTACTGCGA
TATTAATTTTGGAGCAAATT

Downstream 100 bases:

>100_bases
ATAATTAAAACGATAATGGCACCAGTACACTTAAGTATTAGTGCTGAAACCAATATTATAAAAACAAGGAGTTACGCATG
GCAACAGCACAGGAATACCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MGPTSPSVTWRTHSTLVLLALVYVFSFIDRNVIAIVLEPIKQEFGISDTLMGFLSGLAFAILYAGLSLPLSRLADRGGNR
RNIVAVCCGLWSIATMACGMAQHFWQLLLARMTVAVGEAGGIAPSISMVSDLYPPHRRSLAISVLMIGPHLGLLAAMVAG
GWIAQEYGWRSVFLFFGAPGILLALLLFCFTKDPGHGVYDKYTASKNKKVKQESFFKQLNGIMKVKGFIWIAMGCALAGM
AGYGYGIWVPTFMVRNYDMSLAHAGISFGLAGGIFAAIGTIFSGLFCDKLSKRDSRWQIGLPIIGILISLPMGVAFMLWP
ADAFWMIGEIKIPHAIVFAALFSFFNCWWPSLSYAAISHLMTSSQRATGAASLNLFLTLFGAGLGPLLTGTLSDVFGATF
AGEGLKYALVATMMLLLVSAWFYYKGLSPYQTRMKQLDNDEVEAVENAVPPTTINDPLPSS

Sequences:

>Translated_461_residues
MGPTSPSVTWRTHSTLVLLALVYVFSFIDRNVIAIVLEPIKQEFGISDTLMGFLSGLAFAILYAGLSLPLSRLADRGGNR
RNIVAVCCGLWSIATMACGMAQHFWQLLLARMTVAVGEAGGIAPSISMVSDLYPPHRRSLAISVLMIGPHLGLLAAMVAG
GWIAQEYGWRSVFLFFGAPGILLALLLFCFTKDPGHGVYDKYTASKNKKVKQESFFKQLNGIMKVKGFIWIAMGCALAGM
AGYGYGIWVPTFMVRNYDMSLAHAGISFGLAGGIFAAIGTIFSGLFCDKLSKRDSRWQIGLPIIGILISLPMGVAFMLWP
ADAFWMIGEIKIPHAIVFAALFSFFNCWWPSLSYAAISHLMTSSQRATGAASLNLFLTLFGAGLGPLLTGTLSDVFGATF
AGEGLKYALVATMMLLLVSAWFYYKGLSPYQTRMKQLDNDEVEAVENAVPPTTINDPLPSS
>Mature_460_residues
GPTSPSVTWRTHSTLVLLALVYVFSFIDRNVIAIVLEPIKQEFGISDTLMGFLSGLAFAILYAGLSLPLSRLADRGGNRR
NIVAVCCGLWSIATMACGMAQHFWQLLLARMTVAVGEAGGIAPSISMVSDLYPPHRRSLAISVLMIGPHLGLLAAMVAGG
WIAQEYGWRSVFLFFGAPGILLALLLFCFTKDPGHGVYDKYTASKNKKVKQESFFKQLNGIMKVKGFIWIAMGCALAGMA
GYGYGIWVPTFMVRNYDMSLAHAGISFGLAGGIFAAIGTIFSGLFCDKLSKRDSRWQIGLPIIGILISLPMGVAFMLWPA
DAFWMIGEIKIPHAIVFAALFSFFNCWWPSLSYAAISHLMTSSQRATGAASLNLFLTLFGAGLGPLLTGTLSDVFGATFA
GEGLKYALVATMMLLLVSAWFYYKGLSPYQTRMKQLDNDEVEAVENAVPPTTINDPLPSS

Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI185136021, Length=466, Percent_Identity=22.3175965665236, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI215490096, Length=403, Percent_Identity=22.8287841191067, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI14042968, Length=403, Percent_Identity=22.8287841191067, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI2367379, Length=390, Percent_Identity=22.3076923076923, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082320, Length=299, Percent_Identity=25.4180602006689, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789152, Length=340, Percent_Identity=24.7058823529412, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082231, Length=178, Percent_Identity=32.0224719101124, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17539092, Length=501, Percent_Identity=24.3512974051896, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24654037, Length=390, Percent_Identity=23.5897435897436, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24654041, Length=390, Percent_Identity=23.5897435897436, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640209, Length=159, Percent_Identity=27.6729559748428, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49932; Mature: 49800

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTSPSVTWRTHSTLVLLALVYVFSFIDRNVIAIVLEPIKQEFGISDTLMGFLSGLAFA
CCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ILYAGLSLPLSRLADRGGNRRNIVAVCCGLWSIATMACGMAQHFWQLLLARMTVAVGEAG
HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GIAPSISMVSDLYPPHRRSLAISVLMIGPHLGLLAAMVAGGWIAQEYGWRSVFLFFGAPG
CCCCHHHHHHHCCCCCCHHHEEEEEEECCHHHHHHHHHHCCHHHHHCCCCEEEHHHCCHH
ILLALLLFCFTKDPGHGVYDKYTASKNKKVKQESFFKQLNGIMKVKGFIWIAMGCALAGM
HHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYGYGIWVPTFMVRNYDMSLAHAGISFGLAGGIFAAIGTIFSGLFCDKLSKRDSRWQIG
CCCCCHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
LPIIGILISLPMGVAFMLWPADAFWMIGEIKIPHAIVFAALFSFFNCWWPSLSYAAISHL
HHHHHHHHHHHHHHEEHEECCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MTSSQRATGAASLNLFLTLFGAGLGPLLTGTLSDVFGATFAGEGLKYALVATMMLLLVSA
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WFYYKGLSPYQTRMKQLDNDEVEAVENAVPPTTINDPLPSS
HHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GPTSPSVTWRTHSTLVLLALVYVFSFIDRNVIAIVLEPIKQEFGISDTLMGFLSGLAFA
CCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ILYAGLSLPLSRLADRGGNRRNIVAVCCGLWSIATMACGMAQHFWQLLLARMTVAVGEAG
HHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GIAPSISMVSDLYPPHRRSLAISVLMIGPHLGLLAAMVAGGWIAQEYGWRSVFLFFGAPG
CCCCHHHHHHHCCCCCCHHHEEEEEEECCHHHHHHHHHHCCHHHHHCCCCEEEHHHCCHH
ILLALLLFCFTKDPGHGVYDKYTASKNKKVKQESFFKQLNGIMKVKGFIWIAMGCALAGM
HHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYGYGIWVPTFMVRNYDMSLAHAGISFGLAGGIFAAIGTIFSGLFCDKLSKRDSRWQIG
CCCCCHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
LPIIGILISLPMGVAFMLWPADAFWMIGEIKIPHAIVFAALFSFFNCWWPSLSYAAISHL
HHHHHHHHHHHHHHEEHEECCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MTSSQRATGAASLNLFLTLFGAGLGPLLTGTLSDVFGATFAGEGLKYALVATMMLLLVSA
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
WFYYKGLSPYQTRMKQLDNDEVEAVENAVPPTTINDPLPSS
HHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]