| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623952
Identifier: 167623952
GI number: 167623952
Start: 2443227
End: 2443544
Strand: Direct
Name: 167623952
Synonym: Shal_2026
Alternate gene names: NA
Gene position: 2443227-2443544 (Clockwise)
Preceding gene: 167623951
Following gene: 167623953
Centisome position: 46.74
GC content: 40.57
Gene sequence:
>318_bases ATGGCATTAGTGAATTGTCCTAGCTGTAATAAACGTATATCGAGCATGGCTAAAGAGTGTAATCATTGTAAGGCGAAGAT CTCGCCTGACAATGAAAGCCTTAAAGTGATTAGCCACATTAAGCGTTCGAATCAGTTAATGAATCAAAGTTTTTTGGCAT TAACTCTATTTATCGGAGGCGTGGTAACTTGGTTCTGGGGCGGTGAGCCAGCTGAAGGGCTAAGATCCTATATTGCACTT GGTGCATTTGCGTTGGGTTTTGTTGGCTATTTAATTACTAGACTGCAAATTGTGCTGCATAAACGGAAGAAAGTATGA
Upstream 100 bases:
>100_bases CCTGAGCGTTGTATTTATCTTGGTGAAGCATCGTTAATTGCGATGAACGCAGTGGTTGATAAACTTAAATAAGTGGATGC GGTAAACTAAGAGGTAGCCA
Downstream 100 bases:
>100_bases CCGACATAAACAGAGTTATTGATGAGATGCCAGATGATGTGTATCAACGTTTGCTCAGCGGTGTTGAGCTGGGTAAGTGG GACGATGGCACGGTTTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MALVNCPSCNKRISSMAKECNHCKAKISPDNESLKVISHIKRSNQLMNQSFLALTLFIGGVVTWFWGGEPAEGLRSYIAL GAFALGFVGYLITRLQIVLHKRKKV
Sequences:
>Translated_105_residues MALVNCPSCNKRISSMAKECNHCKAKISPDNESLKVISHIKRSNQLMNQSFLALTLFIGGVVTWFWGGEPAEGLRSYIAL GAFALGFVGYLITRLQIVLHKRKKV >Mature_104_residues ALVNCPSCNKRISSMAKECNHCKAKISPDNESLKVISHIKRSNQLMNQSFLALTLFIGGVVTWFWGGEPAEGLRSYIALG AFALGFVGYLITRLQIVLHKRKKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11666; Mature: 11535
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVNCPSCNKRISSMAKECNHCKAKISPDNESLKVISHIKRSNQLMNQSFLALTLFIGG CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVTWFWGGEPAEGLRSYIALGAFALGFVGYLITRLQIVLHKRKKV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALVNCPSCNKRISSMAKECNHCKAKISPDNESLKVISHIKRSNQLMNQSFLALTLFIGG CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVTWFWGGEPAEGLRSYIALGAFALGFVGYLITRLQIVLHKRKKV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA