Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623912

Identifier: 167623912

GI number: 167623912

Start: 2389136

End: 2391577

Strand: Direct

Name: 167623912

Synonym: Shal_1983

Alternate gene names: NA

Gene position: 2389136-2391577 (Clockwise)

Preceding gene: 167623911

Following gene: 167623915

Centisome position: 45.71

GC content: 44.84

Gene sequence:

>2442_bases
ATGAAATTATCTAAATCTACACTGGCAATCGCCATGTTTTTAACGTCCGGCACTGTAATGGCTGCTGGCCCACTATACAC
AACAGACGGTGCAAACCCTCAGCCTTATAAATGGGACACTTCAGCAGGTTCCATTCCTGTCTATGTCGATGGCGGTGCTG
CGTTTACCTTTGATTATGATGGTAGTGTTTTCTTGTCAATTGAACGTGCAAATGAGATCACCCAGTTTGCTTTTGATCAA
TGGAACAATGTCGAAACATCAACTTTTGAGGCTAATATTGCTGGTAGTATCGAAGAGCAAGTCGGGATTGCCGATGTGAC
AGGCGCAAACGCAGCGCAAATTTATACCGTTGAAAATGGCTATGGTTTTTATGTCTTATATGACACCGACGGCAGTATCT
TAGAAGACTTTTTTGGTGTGCCTAAGTCTGCCGTGCTCGGAATTGCTTTCCCTGAGTGGGCTGACGAAAACGGTAATATA
ACCGAAGCCACCGCAGTGCTTAATGGCTGGAATGTTTATGTGCAAGATACTAAAGGCGAGCAAGTAGCTGGTGTATTTAC
CCATGAATTTGGTCACGCGATTAACTTGTCACACTCTCAGACAAATGGACAATTGGCTTATTTAAGTTGGCCTGGTGCTC
CTTTATATCCAGGTGTTGCAGGGTGTGACGTTGAGGCCATTCATGATTTTGAATATCCAGCAGAGTATGGAGGAAACCCT
GCCGATCCAGACATTATCGAAACCATGTTCCCTTTTATTCGTCATGATGGTGTGGGTGGTGTCAGTCAAAGTACCGTGAA
TGTACTTGATGACCGTGTATCGATATCTAACTTGTACCCAACTGCTGAATATAAGAGTCAGTTTGGCTCAATTGAGGGGA
CATTAAGATTAAAGGACGGTCAAACAGAATATAGTGGTATTAATATCATAGCGCGTAATGTCAATGATCCGCTTTTCGAT
GCCGTATCTGCGCAATCTGGTAATTTAACTCAGGGTAAGGTGGGGCCTGATGGCTCATTTAAGATCAATGGTCTAACACC
TGGGCAAAGCTATGTTTTATATACGGAAGAGATCTACCAAGGGGGATATCCAACTCAACAAACACCTTTGGTGTCTGTTG
CAGAATATTGGAATGAGGCCGAAGGTAGTAACCCTGCAGCTGATGATGCCTGTGACGTTACTCCTATCATTGCTGAAGCG
GGCAAGACTAAGCAAGCCGACTTAACTTTCAATGGTTACGATGATGGTATCGAATTTAGACCCATCGTGAATGCACACCT
TACCGATCTGGCTAAAAATGGCCGCTCTTCAATGGGGGTTATTAACGGGATCGGTTTCACATGGGATGAAAATAAAGATT
TTACCATCCTGCCTGATTACATAAGGGTAAATAGCGGCAGGATGAACCGTAATGGTAATAAGTTACTGGTTAATTCAGAC
TTAGATGGTAACGGGATCAGTGCTCCAGCAATCTGGACCAAAGCGCATGGTGCTATGTCTTTAGGTGACTTAACCGGCAA
TACGTGCGGTGGTTCTGGCATGGAAGGGATGCAAGCTGCTTCAGGTTGGGACATCGATGACGCCGGTAATACCGTTGTTG
GATTGGCTTACAAAGATGCCAATAATAACGGTTATTGTACTGAATATGATGAAGGTGAACTGGTGCCATTTATTTGGACT
CCAAAAGCCGGTATGCATGAATTAGACACTCGCGGCGTTAACTGGGATCGCTATAGTTGGATAAGAGCGCATGCTATCTC
AGGTAATGGTGACGTCGTGCTCGGTTCTGCCGATGGCTGGGAAGCCGTGGCCTGGGTTAATGAAGGTGAAATGATCAATC
TCTATGAGGAGGTTGGCGCGACTGAATCCCATGCGGCTTCTTACGATGGTAAAACGGTTGCATTGGCAACTGAGCAGGGA
AACACTTTACTTTGGGATCATACTAAAAAAGGTGATGCAGCATTTACCGATATTGGTGGCCTGACTTGGTGTGAAGACAT
TCCATTTTTATGGTGGGGCCAAGATCTCTGTGTACTCGAAAGTCCTGAATGGGTTCAAAGCACATTTGGTGCCGTCCCAG
CTTCACCTTTTGATATGAACGACGATGGCAGTGTCATCATCGCTCGTGCAGGTGATTTCTGGGCTGGATTTGTCGGTGCT
ATTTATATTGACACCATTGGTTGGATGCCGCTCACTGAGTTTTTCGGCAAGCAGGGAGTCATGGAGGCTGAAAATGCTTA
TATGAACAACCCATTGTCAATTAGTGGCTCAGGTTCAGAAATGGTAGGAGGCATTGCAGGTGTGAATATGTCTTACCACG
TCAACATGGATCAGGTCTATGTGTGTGAAGATGGACAATCTGTAAAAACTGGTTTCCCTAAAGGGCTTATTAGTAAGGTT
AAGTCTGGTGCTGAATTTGGCCGCTGTGAACATCTTAATTAA

Upstream 100 bases:

>100_bases
ACATGATGACTAACCCTACAGCTATCAGTGCCGCTTTCTTTATGAGTGTTGTTGGACGCGCCGTTTCACAGCAGTGGATT
GACAATGGGAAGATGAAATA

Downstream 100 bases:

>100_bases
CAATATGCTTTAATCTAGTCGCCACTCGAGAGTACTCGAGTGGCTTAATCTGCAATTCTAATCACTAGTCTCAATCTCTA
AACACCTGCACTAAACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 813; Mature: 813

Protein sequence:

>813_residues
MKLSKSTLAIAMFLTSGTVMAAGPLYTTDGANPQPYKWDTSAGSIPVYVDGGAAFTFDYDGSVFLSIERANEITQFAFDQ
WNNVETSTFEANIAGSIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI
TEATAVLNGWNVYVQDTKGEQVAGVFTHEFGHAINLSHSQTNGQLAYLSWPGAPLYPGVAGCDVEAIHDFEYPAEYGGNP
ADPDIIETMFPFIRHDGVGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD
AVSAQSGNLTQGKVGPDGSFKINGLTPGQSYVLYTEEIYQGGYPTQQTPLVSVAEYWNEAEGSNPAADDACDVTPIIAEA
GKTKQADLTFNGYDDGIEFRPIVNAHLTDLAKNGRSSMGVINGIGFTWDENKDFTILPDYIRVNSGRMNRNGNKLLVNSD
LDGNGISAPAIWTKAHGAMSLGDLTGNTCGGSGMEGMQAASGWDIDDAGNTVVGLAYKDANNNGYCTEYDEGELVPFIWT
PKAGMHELDTRGVNWDRYSWIRAHAISGNGDVVLGSADGWEAVAWVNEGEMINLYEEVGATESHAASYDGKTVALATEQG
NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCVLESPEWVQSTFGAVPASPFDMNDDGSVIIARAGDFWAGFVGA
IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVNMSYHVNMDQVYVCEDGQSVKTGFPKGLISKV
KSGAEFGRCEHLN

Sequences:

>Translated_813_residues
MKLSKSTLAIAMFLTSGTVMAAGPLYTTDGANPQPYKWDTSAGSIPVYVDGGAAFTFDYDGSVFLSIERANEITQFAFDQ
WNNVETSTFEANIAGSIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI
TEATAVLNGWNVYVQDTKGEQVAGVFTHEFGHAINLSHSQTNGQLAYLSWPGAPLYPGVAGCDVEAIHDFEYPAEYGGNP
ADPDIIETMFPFIRHDGVGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD
AVSAQSGNLTQGKVGPDGSFKINGLTPGQSYVLYTEEIYQGGYPTQQTPLVSVAEYWNEAEGSNPAADDACDVTPIIAEA
GKTKQADLTFNGYDDGIEFRPIVNAHLTDLAKNGRSSMGVINGIGFTWDENKDFTILPDYIRVNSGRMNRNGNKLLVNSD
LDGNGISAPAIWTKAHGAMSLGDLTGNTCGGSGMEGMQAASGWDIDDAGNTVVGLAYKDANNNGYCTEYDEGELVPFIWT
PKAGMHELDTRGVNWDRYSWIRAHAISGNGDVVLGSADGWEAVAWVNEGEMINLYEEVGATESHAASYDGKTVALATEQG
NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCVLESPEWVQSTFGAVPASPFDMNDDGSVIIARAGDFWAGFVGA
IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVNMSYHVNMDQVYVCEDGQSVKTGFPKGLISKV
KSGAEFGRCEHLN
>Mature_813_residues
MKLSKSTLAIAMFLTSGTVMAAGPLYTTDGANPQPYKWDTSAGSIPVYVDGGAAFTFDYDGSVFLSIERANEITQFAFDQ
WNNVETSTFEANIAGSIEEQVGIADVTGANAAQIYTVENGYGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNI
TEATAVLNGWNVYVQDTKGEQVAGVFTHEFGHAINLSHSQTNGQLAYLSWPGAPLYPGVAGCDVEAIHDFEYPAEYGGNP
ADPDIIETMFPFIRHDGVGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDGQTEYSGINIIARNVNDPLFD
AVSAQSGNLTQGKVGPDGSFKINGLTPGQSYVLYTEEIYQGGYPTQQTPLVSVAEYWNEAEGSNPAADDACDVTPIIAEA
GKTKQADLTFNGYDDGIEFRPIVNAHLTDLAKNGRSSMGVINGIGFTWDENKDFTILPDYIRVNSGRMNRNGNKLLVNSD
LDGNGISAPAIWTKAHGAMSLGDLTGNTCGGSGMEGMQAASGWDIDDAGNTVVGLAYKDANNNGYCTEYDEGELVPFIWT
PKAGMHELDTRGVNWDRYSWIRAHAISGNGDVVLGSADGWEAVAWVNEGEMINLYEEVGATESHAASYDGKTVALATEQG
NTLLWDHTKKGDAAFTDIGGLTWCEDIPFLWWGQDLCVLESPEWVQSTFGAVPASPFDMNDDGSVIIARAGDFWAGFVGA
IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVNMSYHVNMDQVYVCEDGQSVKTGFPKGLISKV
KSGAEFGRCEHLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87372; Mature: 87372

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKSTLAIAMFLTSGTVMAAGPLYTTDGANPQPYKWDTSAGSIPVYVDGGAAFTFDYD
CCCCCCEEEEEEEEECCCEEECCCEEECCCCCCCCEEECCCCCCEEEEECCCEEEEEECC
GSVFLSIERANEITQFAFDQWNNVETSTFEANIAGSIEEQVGIADVTGANAAQIYTVENG
CEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCEEEECCCCCEEEEEEECC
YGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNITEATAVLNGWNVYVQDTKGE
EEEEEEECCCCHHHHHHHCCCCHHEEEEECCCCCCCCCCEEEEEEEEECCEEEEECCCCC
QVAGVFTHEFGHAINLSHSQTNGQLAYLSWPGAPLYPGVAGCDVEAIHDFEYPAEYGGNP
EEEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEECCCCCHHHCCCC
ADPDIIETMFPFIRHDGVGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDG
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEHHHCCCCHHHHHHCCCCEEEEEEECC
QTEYSGINIIARNVNDPLFDAVSAQSGNLTQGKVGPDGSFKINGLTPGQSYVLYTEEIYQ
CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHC
GGYPTQQTPLVSVAEYWNEAEGSNPAADDACDVTPIIAEAGKTKQADLTFNGYDDGIEFR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCEEEE
PIVNAHLTDLAKNGRSSMGVINGIGFTWDENKDFTILPDYIRVNSGRMNRNGNKLLVNSD
EECHHHHHHHHHCCCCCCCEEECCCEEECCCCCEEEECHHEEECCCEECCCCCEEEEECC
LDGNGISAPAIWTKAHGAMSLGDLTGNTCGGSGMEGMQAASGWDIDDAGNTVVGLAYKDA
CCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEEC
NNNGYCTEYDEGELVPFIWTPKAGMHELDTRGVNWDRYSWIRAHAISGNGDVVLGSADGW
CCCCCEEECCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCC
EAVAWVNEGEMINLYEEVGATESHAASYDGKTVALATEQGNTLLWDHTKKGDAAFTDIGG
EEEEEECCCCEEEEHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECCC
LTWCEDIPFLWWGQDLCVLESPEWVQSTFGAVPASPFDMNDDGSVIIARAGDFWAGFVGA
CCHHHCCCEEEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHE
IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVNMSYHVNMDQVY
EEEHHCCCCHHHHHHCCCCCCCCCHHHCCCCEEECCCCCHHHCEEECCCEEEEECCCEEE
VCEDGQSVKTGFPKGLISKVKSGAEFGRCEHLN
EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLSKSTLAIAMFLTSGTVMAAGPLYTTDGANPQPYKWDTSAGSIPVYVDGGAAFTFDYD
CCCCCCEEEEEEEEECCCEEECCCEEECCCCCCCCEEECCCCCCEEEEECCCEEEEEECC
GSVFLSIERANEITQFAFDQWNNVETSTFEANIAGSIEEQVGIADVTGANAAQIYTVENG
CEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCEEEECCCCCEEEEEEECC
YGFYVLYDTDGSILEDFFGVPKSAVLGIAFPEWADENGNITEATAVLNGWNVYVQDTKGE
EEEEEEECCCCHHHHHHHCCCCHHEEEEECCCCCCCCCCEEEEEEEEECCEEEEECCCCC
QVAGVFTHEFGHAINLSHSQTNGQLAYLSWPGAPLYPGVAGCDVEAIHDFEYPAEYGGNP
EEEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHEEECCCCCHHHCCCC
ADPDIIETMFPFIRHDGVGGVSQSTVNVLDDRVSISNLYPTAEYKSQFGSIEGTLRLKDG
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEHHHCCCCHHHHHHCCCCEEEEEEECC
QTEYSGINIIARNVNDPLFDAVSAQSGNLTQGKVGPDGSFKINGLTPGQSYVLYTEEIYQ
CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHC
GGYPTQQTPLVSVAEYWNEAEGSNPAADDACDVTPIIAEAGKTKQADLTFNGYDDGIEFR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCEEEE
PIVNAHLTDLAKNGRSSMGVINGIGFTWDENKDFTILPDYIRVNSGRMNRNGNKLLVNSD
EECHHHHHHHHHCCCCCCCEEECCCEEECCCCCEEEECHHEEECCCEECCCCCEEEEECC
LDGNGISAPAIWTKAHGAMSLGDLTGNTCGGSGMEGMQAASGWDIDDAGNTVVGLAYKDA
CCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEEEEC
NNNGYCTEYDEGELVPFIWTPKAGMHELDTRGVNWDRYSWIRAHAISGNGDVVLGSADGW
CCCCCEEECCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCCC
EAVAWVNEGEMINLYEEVGATESHAASYDGKTVALATEQGNTLLWDHTKKGDAAFTDIGG
EEEEEECCCCEEEEHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEECCC
LTWCEDIPFLWWGQDLCVLESPEWVQSTFGAVPASPFDMNDDGSVIIARAGDFWAGFVGA
CCHHHCCCEEEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHE
IYIDTIGWMPLTEFFGKQGVMEAENAYMNNPLSISGSGSEMVGGIAGVNMSYHVNMDQVY
EEEHHCCCCHHHHHHCCCCCCCCCHHHCCCCEEECCCCCHHHCEEECCCEEEEECCCEEE
VCEDGQSVKTGFPKGLISKVKSGAEFGRCEHLN
EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA