| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is eptA [H]
Identifier: 167623886
GI number: 167623886
Start: 2350361
End: 2351980
Strand: Direct
Name: eptA [H]
Synonym: Shal_1956
Alternate gene names: 167623886
Gene position: 2350361-2351980 (Clockwise)
Preceding gene: 167623885
Following gene: 167623887
Centisome position: 44.97
GC content: 39.57
Gene sequence:
>1620_bases GTGTTAGCACGTCTTAAAAATTTAAATAGCATTCAATTTACCGTCATACTTTCGATTTACTATGTATGCGTGTTTAATAT TCCTCTTTTTCAAATAATCAAACAGGGCGTAGATAAACAAGCCGATGTCAATATGGCATTTATTGCCAGTATGCCTTTGT TTCTGTTTTTCGCTCTGTCATTTTTATTTAGCCTTTTTAGTGTTAAGTATCTAGCAAAGCCATTTTTTATTATTTTGACG TTGATGTCGTCGAGTGTCTTTTTTGCGGCATTTCAATATGGTGTGGTATTTGACTACGGCATGATTGAAAACACCTTTCA GACCAATCAATCAGAAGCGACAACCTACCTTAATTGGGCGTCAGTTGTTAACTTCGTGGTGACAGGCATTATCCCCTCAC TGTTTATCTATAAAGCTAACATTCAGTACAAGCCCATAACGAAAGAACTGCTGCACAAGGCTTTATTTATGCTGTCTATG CTTGCAGGTATCGTCGTGATTGCTATGTTCTATTATCAAAATTACGTCGCATTTGGTCGAAATAACGACATCATGAAGCG TTATATTATCCCAACATATTTTATTGGTTCAACTGTTAAGTATCTAAAAATTAACTACTTACAAGAGCCTTTAGCGTATA AACAGATTGGTTTGGACGCCAAAAACACCACAGACAAAGCCAAGCCTAATTTAGTCATTTTGGTGGTAGGAGAAACGGCT AGGGCGGCCAATTATGCATATTATGGTTACGACAGACCGACCAATGCGCATACTAAAGAGCAGGGGATAGTGGTGTTTAA AGACACCCATTCATGTGGTACTGCTACAGCCGTCTCTTTGCCTTGCATGTTTTCTAGAATGGATCGTGATAATTATAATT CGCGTCGAGAAAGAGCCCAAGACAGCGCTATCGATGTGTTAAACCATGCAGGGATCCAACTTGAATGGCTCGACAATGAC AGTGGCTGTAAAGGTGTTTGCCAGAATATTGAGAGTATCACAATAGATCATAATAGCGATCCTAAGCTGTGTAACGGTGA GTATTGTTACGATCAAGTGTTGCTTAATGAGTTAGGTAAGCGGCTTAAAACCATTAAAGATGAAGACACATTATTAGTGC TACACATCATTGGTTCTCATGGGCCGACCTATTATCTACGTTATCCGGAGAAGTATCGTCAGTTTGTGCCTGACTGCCAA CGTAGCGATATTCAAAACTGCAGCCATGAAGAGTTGGTTAACACTTACGATAATACTATTTTATATACCGACTTTATCCT CTCACAGGTCGTTAATAAGCTAAAAGCAACAAGCGCGCAATTCGATACTGCAATGCTCTATATATCAGATCATGGTGAGT CATTAGGCGAAAAAGGCATGTATCTTCATGGTACGCCTTATTCATTTGCGCCCGATGAGCAAACAAAAGTGCCTTTCTTG GGCTGGTTCTCAAGCGGTTTTGCGGAGCAAAATCACTTAAACCTTGCTTGCTTAGCAAAAGAAGCTAACAAGGGCGGTTT CTCTCACGACAATTTATTCGATAGCTTACTTGGTTTGATGAATGTCCGTAGTGAGGTTTATCGGCCAAAATCTGATATTT TCGCGAGTTGTCGAAAATAA
Upstream 100 bases:
>100_bases TTAGCTGTTTTATTTAGGTGCTATTATATGGCCATATCCGCCGATAACGGCTATAGGCAAGGAGAGCCCAAATAATCTTA AAAATAAGTGAGTAAACTAG
Downstream 100 bases:
>100_bases AATCTAATTTATCTCTAAAAAGGGATGGAAACATCTTCATTTTTGTTTAAAGTATTGATAAGTAAAGCTATCAAGATGGA GTGACTTTTAACATGGATAT
Product: sulfatase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALSFLFSLFSVKYLAKPFFIILT LMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWASVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSM LAGIVVIAMFYYQNYVAFGRNNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQDSAIDVLNHAGIQLEWLDND SGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGKRLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQ RSDIQNCSHEELVNTYDNTILYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK
Sequences:
>Translated_539_residues MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALSFLFSLFSVKYLAKPFFIILT LMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWASVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSM LAGIVVIAMFYYQNYVAFGRNNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQDSAIDVLNHAGIQLEWLDND SGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGKRLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQ RSDIQNCSHEELVNTYDNTILYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK >Mature_539_residues MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALSFLFSLFSVKYLAKPFFIILT LMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWASVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSM LAGIVVIAMFYYQNYVAFGRNNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQDSAIDVLNHAGIQLEWLDND SGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGKRLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQ RSDIQNCSHEELVNTYDNTILYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=528, Percent_Identity=36.7424242424242, Blast_Score=366, Evalue=1e-102, Organism=Escherichia coli, GI87082286, Length=468, Percent_Identity=27.5641025641026, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI87082223, Length=455, Percent_Identity=25.4945054945055, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1787035, Length=280, Percent_Identity=24.6428571428571, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61273; Mature: 61273
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALS CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FLFSLFSVKYLAKPFFIILTLMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCHHHHHHHHH SVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSMLAGIVVIAMFYYQNYVAFGR HHHHHHHHHHHHHHEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC NNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA CCCHHHHHHCHHHHHCCCEEHEEHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQ CCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH DSAIDVLNHAGIQLEWLDNDSGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGK HHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH RLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQRSDIQNCSHEELVNTYDNTI HHHHCCCCCCEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHCCCCHHHHHHHHCCEE LYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL EHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEE GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK EEHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MLARLKNLNSIQFTVILSIYYVCVFNIPLFQIIKQGVDKQADVNMAFIASMPLFLFFALS CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FLFSLFSVKYLAKPFFIILTLMSSSVFFAAFQYGVVFDYGMIENTFQTNQSEATTYLNWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCHHHHHHHHH SVVNFVVTGIIPSLFIYKANIQYKPITKELLHKALFMLSMLAGIVVIAMFYYQNYVAFGR HHHHHHHHHHHHHHEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC NNDIMKRYIIPTYFIGSTVKYLKINYLQEPLAYKQIGLDAKNTTDKAKPNLVILVVGETA CCCHHHHHHCHHHHHCCCEEHEEHHHHHCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCC RAANYAYYGYDRPTNAHTKEQGIVVFKDTHSCGTATAVSLPCMFSRMDRDNYNSRRERAQ CCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH DSAIDVLNHAGIQLEWLDNDSGCKGVCQNIESITIDHNSDPKLCNGEYCYDQVLLNELGK HHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH RLKTIKDEDTLLVLHIIGSHGPTYYLRYPEKYRQFVPDCQRSDIQNCSHEELVNTYDNTI HHHHCCCCCCEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHCCCCHHHHHHHHCCEE LYTDFILSQVVNKLKATSAQFDTAMLYISDHGESLGEKGMYLHGTPYSFAPDEQTKVPFL EHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEE GWFSSGFAEQNHLNLACLAKEANKGGFSHDNLFDSLLGLMNVRSEVYRPKSDIFASCRK EEHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]