Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623868

Identifier: 167623868

GI number: 167623868

Start: 2331299

End: 2331790

Strand: Direct

Name: 167623868

Synonym: Shal_1938

Alternate gene names: NA

Gene position: 2331299-2331790 (Clockwise)

Preceding gene: 167623866

Following gene: 167623869

Centisome position: 44.6

GC content: 48.17

Gene sequence:

>492_bases
ATGAGTATTTCGCAGCTAGAAAGTGCATTAATCAATGAATCTCAGTTAGGTTCGAGACTCAACCATGCCGTTGGTTCTAA
CCGACGGGGTGAGTTTGGTCTATTGCTTTCTATGCTATCGGAAGATGCGCGTGATATGGCCCAGTTTCAGACTGCGGCTC
ACCTTAGCCATGATTTGCGAATCAAATTCGAGCTTCCGGCGCCACAGACGTTAATTGGACAACTCGATGATGACATAATG
GTGACAGATAACAGCTTAGTCCACCAACAAAGCGGCGCCACGGCTTTTCGTTTAGCGAATACGCTCAATGAAGAGGCTTT
GGTTATTCGCTGCAAAGAGTCGTTAGCGATGCAGGAGGTGCTGGCTAACTGTGCTCTGTCTGTTCGTCAGCGCTATGGCC
AAGTGTCGGTAGCACCCAAAGTGGAACTCACCCATTTTGTCGATCAATTGGTCATGCAGCGTCAAATGGGTGAATTAATC
GCCCAAGCTTGA

Upstream 100 bases:

>100_bases
ATGAGCTATGAGCTTAAAACATTAAATAAAACCTAAAGTATTCGTTTGAACGGTCGATTAACTTACAACGAGTTGTTTTG
TAGGTTTATTTTTGTTCAAA

Downstream 100 bases:

>100_bases
AGATGAGTCTGCTTTATTTTGAATTGCTGATATATAATCAACCATTCAAATGATCCATTGTGAGACACATTAAGATGAAA
AATATTCAAAAGGCACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSISQLESALINESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTAAHLSHDLRIKFELPAPQTLIGQLDDDIM
VTDNSLVHQQSGATAFRLANTLNEEALVIRCKESLAMQEVLANCALSVRQRYGQVSVAPKVELTHFVDQLVMQRQMGELI
AQA

Sequences:

>Translated_163_residues
MSISQLESALINESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTAAHLSHDLRIKFELPAPQTLIGQLDDDIM
VTDNSLVHQQSGATAFRLANTLNEEALVIRCKESLAMQEVLANCALSVRQRYGQVSVAPKVELTHFVDQLVMQRQMGELI
AQA
>Mature_162_residues
SISQLESALINESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTAAHLSHDLRIKFELPAPQTLIGQLDDDIMV
TDNSLVHQQSGATAFRLANTLNEEALVIRCKESLAMQEVLANCALSVRQRYGQVSVAPKVELTHFVDQLVMQRQMGELIA
QA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18003; Mature: 17872

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISQLESALINESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTAAHLSHDLR
CCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IKFELPAPQTLIGQLDDDIMVTDNSLVHQQSGATAFRLANTLNEEALVIRCKESLAMQEV
EEEECCCCHHHHHCCCCCEEEECCHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHH
LANCALSVRQRYGQVSVAPKVELTHFVDQLVMQRQMGELIAQA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SISQLESALINESQLGSRLNHAVGSNRRGEFGLLLSMLSEDARDMAQFQTAAHLSHDLR
CHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IKFELPAPQTLIGQLDDDIMVTDNSLVHQQSGATAFRLANTLNEEALVIRCKESLAMQEV
EEEECCCCHHHHHCCCCCEEEECCHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHH
LANCALSVRQRYGQVSVAPKVELTHFVDQLVMQRQMGELIAQA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA