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The map label for this gene is yjdL [C]

Identifier: 167623825

GI number: 167623825

Start: 2277205

End: 2278926

Strand: Reverse

Name: yjdL [C]

Synonym: Shal_1895

Alternate gene names: 167623825

Gene position: 2278926-2277205 (Counterclockwise)

Preceding gene: 167623828

Following gene: 167623823

Centisome position: 43.6

GC content: 46.75

Gene sequence:

>1722_bases
ATGACTCAAGCAGGACGCACCGCGCTGCCCCCTACATTCTTCGTTGCTAACACGATGGAGATCTTTGAACGCTTGGCCTG
GTATGGTTTTTTTGCCCTCTCATCCCTTTATATGACCTCTCCGCAAAACCAAGGTGGATTAGGCTTTTCTGATCAAGAAC
GTGGCTTATTACAAGGTATGATCCCATTTTTTCTTTATCTATTTCCGGTATTAACCGGCGCACTTGCCGACCGTTATGGT
TACCGGAAAATGTTTCTCGTCGCCTATGCCATTATGTGTCCCAGCTATTACCTACTTGGTCAAGTCGATACCTTTATGGG
ATTTTTTGTTGCCTTTATGGGGGTCGCAGTCGGAGCGGCCTGCTTTAAACCCGTCGTGACAGGCACTGTGGCGCGAACCA
CAGATGATACCAACCGAGGATTAGGTTTTGGGATCTTCTATATGATGGTCAATATAGGTGGTTTCTTAGGGCCCTTTATT
GCTGGCTACGTCAGAGCGATTAGCTGGGACTGGGTATTTATCATGTCATCATTCTGGATTGCGGTTAACTTTATTCCAGC
TTACTTTTTCTATAAAGAGCCAACGGATCAAAATCAGCAAAAAGGTAAGCCGCTTAAAGCCGTATTCCAAGATATACAAG
AAGTACTCGGTAACGCCCGTTTTGCCATTTTGTTCTTTGGTACCCTAATTATCTTAATGTCCTATGGTGCCAAGTGGATC
ACAGGTGAAACCACGCTCATAATCTATGCCGCGTGGTTCGCGGGCCATATCATCTGGGACAAGCTTGCATCATCAAAACC
ACAAGCGCCTTGGTATGCTCAGAAAATCAGCCTAGGTAATAAACCTTTTGTGATCTATCTACTTATTCTGTCTGGTATGT
GGATGGTCTATCAGCAGATATTTATTACACTGCCTATCTATATCCGTGACTTTGTCGATACCTCCGATCTGGTGTTGATG
CTCGCAGGGCACCCAGACTTACAGCAGTTCTTTGCCCCTGTCGATATTAGCTTACTTCAATCAGAATTAACCCGATTGAC
CCATGAGGTCAGTGCCGGAACACTGAATGTTAAACAAGCTTATTTTGAACTGGTACATACTAAAGTCATGGTGCCTACTG
CAGAGATAAGCCAAGCCTTTAATGCAATAGCACAAACACCAGCACTCGCAGCGCAATACGCACAAACTTGGGCTAGCGAA
TACCGTCAAATTAACCCTGAGTACCTCATCGGGCTTAACTTCCTGTCAATTGTAGTGATGCAGTTGATGATCAGCCGTTT
TGTCGAGCGCTTCCAAGCTCTGCCAGTCCTAGTCGGTGGCACCATTATCCTCGCGCTAGGTACCGCCATTGGCGGCATTG
CCCATGGTGCAATCATGGGCGGCACTATGGTATTAACCTCCATTTTGGTCTTCTCTGTCGGCGAGATGGTTGCCTCACCT
AAGAGCCAAGAGTATGTGGCAAGCTTTGCACCACATGACAAGAAAGCGATGTTTATGGGTTACTACTTTGTCTCTTCGGC
GATTGGTTTCTTGCTCGCGGGCCCATTATCAGGCTACCTCTACTCAGAAGTCGCCAAAGGCGCAGAACGCCCTGATCTGA
TGTGGTACATCATTGGTGGTTTTGGGTTATTGACTGCGTTTGGCCTAGTGATGTTCCACAAGTTTGGTACCACGCCACAA
GCAGATGATGGAGCTGAAACACCACTAGCTCAGGCAAGCTAA

Upstream 100 bases:

>100_bases
ACTTACTCAGCGAACAAGCTGCTAATTTAAACAATAAGCTCCACTTTTATGTAACATGTGATAGCATAAATCAAAATGTA
TAAAATATACGGATTGTAAT

Downstream 100 bases:

>100_bases
GTGACTTTATATAAGTGACTTTATATAAGTGACTTTATATAAGATAAGCCTGACTTGATAAGACGTGTCTAGTGTTTAAG
ACGTGCCCAGTGTTAAAATA

Product: major facilitator transporter

Products: NA

Alternate protein names: Dipeptide/Tripeptide Permease; Transport-Related Membrane Protein; Permease; Peptide/Proton Symporter Family Protein; Proton-Dependent Peptide Transporter; Amino Acid/Peptide Transporter

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSDQERGLLQGMIPFFLYLFPVLTGALADRYG
YRKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFI
AGYVRAISWDWVFIMSSFWIAVNFIPAYFFYKEPTDQNQQKGKPLKAVFQDIQEVLGNARFAILFFGTLIILMSYGAKWI
TGETTLIIYAAWFAGHIIWDKLASSKPQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLM
LAGHPDLQQFFAPVDISLLQSELTRLTHEVSAGTLNVKQAYFELVHTKVMVPTAEISQAFNAIAQTPALAAQYAQTWASE
YRQINPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILALGTAIGGIAHGAIMGGTMVLTSILVFSVGEMVASP
KSQEYVASFAPHDKKAMFMGYYFVSSAIGFLLAGPLSGYLYSEVAKGAERPDLMWYIIGGFGLLTAFGLVMFHKFGTTPQ
ADDGAETPLAQAS

Sequences:

>Translated_573_residues
MTQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSDQERGLLQGMIPFFLYLFPVLTGALADRYG
YRKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFI
AGYVRAISWDWVFIMSSFWIAVNFIPAYFFYKEPTDQNQQKGKPLKAVFQDIQEVLGNARFAILFFGTLIILMSYGAKWI
TGETTLIIYAAWFAGHIIWDKLASSKPQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLM
LAGHPDLQQFFAPVDISLLQSELTRLTHEVSAGTLNVKQAYFELVHTKVMVPTAEISQAFNAIAQTPALAAQYAQTWASE
YRQINPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILALGTAIGGIAHGAIMGGTMVLTSILVFSVGEMVASP
KSQEYVASFAPHDKKAMFMGYYFVSSAIGFLLAGPLSGYLYSEVAKGAERPDLMWYIIGGFGLLTAFGLVMFHKFGTTPQ
ADDGAETPLAQAS
>Mature_572_residues
TQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSDQERGLLQGMIPFFLYLFPVLTGALADRYGY
RKMFLVAYAIMCPSYYLLGQVDTFMGFFVAFMGVAVGAACFKPVVTGTVARTTDDTNRGLGFGIFYMMVNIGGFLGPFIA
GYVRAISWDWVFIMSSFWIAVNFIPAYFFYKEPTDQNQQKGKPLKAVFQDIQEVLGNARFAILFFGTLIILMSYGAKWIT
GETTLIIYAAWFAGHIIWDKLASSKPQAPWYAQKISLGNKPFVIYLLILSGMWMVYQQIFITLPIYIRDFVDTSDLVLML
AGHPDLQQFFAPVDISLLQSELTRLTHEVSAGTLNVKQAYFELVHTKVMVPTAEISQAFNAIAQTPALAAQYAQTWASEY
RQINPEYLIGLNFLSIVVMQLMISRFVERFQALPVLVGGTIILALGTAIGGIAHGAIMGGTMVLTSILVFSVGEMVASPK
SQEYVASFAPHDKKAMFMGYYFVSSAIGFLLAGPLSGYLYSEVAKGAERPDLMWYIIGGFGLLTAFGLVMFHKFGTTPQA
DDGAETPLAQAS

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63379; Mature: 63248

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQAGRTALPPTFFVANTMEIFERLAWYGFFALSSLYMTSPQNQGGLGFSDQERGLLQGM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH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HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA