| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623728
Identifier: 167623728
GI number: 167623728
Start: 2150982
End: 2151224
Strand: Reverse
Name: 167623728
Synonym: Shal_1798
Alternate gene names: NA
Gene position: 2151224-2150982 (Counterclockwise)
Preceding gene: 167623729
Following gene: 167623725
Centisome position: 41.16
GC content: 40.33
Gene sequence:
>243_bases TTGTATTCAAATATTGCGTACCCCGTTACTAATCAACAAGAGTCTTACCGTTTTTTTAATTTAAGCCGCAGTGATGATGT TAGTCGGTTGAAAATCAATTTTCCCTGCTCGACAGATGCTTATACCAATCAGTATAAAGAATTGGTCGCTCAGCGAGAGT TTAGCGGTTATGAGGCAAGGCAACGAGTGAAGAGCATAGTTGTTCTACGGTTAAGCTCGTTAACACAGCATCAGAATCGC TAA
Upstream 100 bases:
>100_bases TGCATTAGGCGCCGTTTTTTTATAGGCTCTTTTGCATAGGGCTCTTTTTATAGCACCTTTGTTATTGCCATTTTTCTTTC ATCCGTCCGCATCACTTCTG
Downstream 100 bases:
>100_bases AACTCGCCATTCTGGAGCGTTTTTGGCTGCCTACTTCTGCGTTGAACGGCTTCACAAGGGAACAACCATTCTTTCAGCTA TTCGCCTTGAATTAGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR
Sequences:
>Translated_80_residues MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR >Mature_80_residues MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEARQRVKSIVVLRLSSLTQHQNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9459; Mature: 9459
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEAR CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH QRVKSIVVLRLSSLTQHQNR HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYSNIAYPVTNQQESYRFFNLSRSDDVSRLKINFPCSTDAYTNQYKELVAQREFSGYEAR CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH QRVKSIVVLRLSSLTQHQNR HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA