Click here to switch to the map view.

The map label for this gene is 167623677

Identifier: 167623677

GI number: 167623677

Start: 2097483

End: 2097875

Strand: Reverse

Name: 167623677

Synonym: Shal_1746

Alternate gene names: NA

Gene position: 2097875-2097483 (Counterclockwise)

Preceding gene: 167623688

Following gene: 167623673

Centisome position: 40.14

GC content: 41.98

Gene sequence:

>393_bases
TTGGATAACTTCGGTGATATAGATGAGCATGAAGTAATGGAAAGCTTCAGGAAAATGAAACGTCATGTTGGCATTGTTTA
TTTCATGAATACGGCGAAACATGATTCATATCGAAATATCGATGATCCTAACTATCGAGAGCCAACAAACGCTGAAGTTG
CAGAGGTTATCGAAACGATGATCTTTATTGGGCACACCAAGACCGACATAGCTAGAATGCTAGGCATTAAAACTGTCAGC
AAAGACAAGACTAAGGTGCTACGAAAGTGGTGTGATGGCGAGCCAACTGATACCTCTAGTATTCCCCATTCATCATGGGT
CCACCTTCTAGTGCTAAGTGGCAAGATATGTCTTTACAATGCAGTTCCGGAAGAAGGATGGACTAGAGGATAG

Upstream 100 bases:

>100_bases
TCCAACTTTTTAAAAAAGAATATATGGAGGGACTTTATTTGTTTTCCCTCCCGCACTGAGGTAGCATGTCAGAATAGAAA
AGTAATTGAGGAAATAAAGT

Downstream 100 bases:

>100_bases
CAATTCTCGGACTTAAGATGTAGTAGCTCAGACTTGATCTGACAGTTACCCGTTTTTTGAAGGTATCTGTCAGCTTAGAT
TTGAGCTAAGTTTTTATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDNFGDIDEHEVMESFRKMKRHVGIVYFMNTAKHDSYRNIDDPNYREPTNAEVAEVIETMIFIGHTKTDIARMLGIKTVS
KDKTKVLRKWCDGEPTDTSSIPHSSWVHLLVLSGKICLYNAVPEEGWTRG

Sequences:

>Translated_130_residues
MDNFGDIDEHEVMESFRKMKRHVGIVYFMNTAKHDSYRNIDDPNYREPTNAEVAEVIETMIFIGHTKTDIARMLGIKTVS
KDKTKVLRKWCDGEPTDTSSIPHSSWVHLLVLSGKICLYNAVPEEGWTRG
>Mature_130_residues
MDNFGDIDEHEVMESFRKMKRHVGIVYFMNTAKHDSYRNIDDPNYREPTNAEVAEVIETMIFIGHTKTDIARMLGIKTVS
KDKTKVLRKWCDGEPTDTSSIPHSSWVHLLVLSGKICLYNAVPEEGWTRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14943; Mature: 14943

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFGDIDEHEVMESFRKMKRHVGIVYFMNTAKHDSYRNIDDPNYREPTNAEVAEVIETM
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IFIGHTKTDIARMLGIKTVSKDKTKVLRKWCDGEPTDTSSIPHSSWVHLLVLSGKICLYN
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCEEEEE
AVPEEGWTRG
CCCCCCCCCC
>Mature Secondary Structure
MDNFGDIDEHEVMESFRKMKRHVGIVYFMNTAKHDSYRNIDDPNYREPTNAEVAEVIETM
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IFIGHTKTDIARMLGIKTVSKDKTKVLRKWCDGEPTDTSSIPHSSWVHLLVLSGKICLYN
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCEEEEE
AVPEEGWTRG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA