| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623659
Identifier: 167623659
GI number: 167623659
Start: 2071553
End: 2072245
Strand: Reverse
Name: 167623659
Synonym: Shal_1728
Alternate gene names: NA
Gene position: 2072245-2071553 (Counterclockwise)
Preceding gene: 167623662
Following gene: 167623657
Centisome position: 39.65
GC content: 44.3
Gene sequence:
>693_bases ATGGGACTGGCTCCACGAAACTGTACCTCAAACATGCTTCTACCTACTCTCTATTCATTCAGACGTTGCCCTTACGCAAT GCGCGCCAGACTTGGTATTTTGCTATCAGGACAAAAAGTCAGCCTTAAAGAGATAATCTTGAAACATAAACCTGAGCCAA TGTTAGCCGCCTCGCCCAAAGGCACGGTTCCAGTACTTATCTTGCAAGATGGCACTGTAATCGAGGAGAGCCTAGAAATC ATGTGTTGGGCACTGACAAATAACGACCCGCAAAATTTATTACTAAGCCATAATCCGCAACAACAAGAGTTTGCTCAAGC GCTTATTCATACTAATGACCACAGCTTTAAACCTTGGCTGGATAAATATAAGTATGCCGACAGGTACCCTGAGCACAGCG AACAATATTACCGACAGCAAGGCGAGCAATATATCGCGCAACTTGAAAGCATATTGTCAAAGCAGCCGCAGCTTATGGGT CATCAAGCCTCGATTGCCGATTACGCGATTTTCCCGTTTATTCGTCAATTCGCATCAGTAGATAAAATCTGGTTTGCTCA TAGTGACTATCTGAATGTGCAGCGCTGGCTAAAAGCCCATGTTGAAAGTGATGATTTCAGTGCCATCATGAAAAAATACC CGACTTGGCTTGAAAGTGGTGACAGCTTCGAGTTTGGGCTAATGTCGAATTAG
Upstream 100 bases:
>100_bases CAAAGCTGGTAGGCCTGCGCTTGCCTAACAAGCATTATGCTGGTTGAAAAAATATCAAAAAATAAATTATTAGTTGTCAT TTAAGCTTTGTCTGTTAAAA
Downstream 100 bases:
>100_bases TTGTATTAACGCAAAAGCACTCGCTCTTAAGTCTGTTGGCAAAGTGATAAAAGTTTGCCAATAAGTACAGTATTCAATTC AGATAGAAAACTAGCGAATA
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutathione-S-Transferase Domain-Containing Protein; Glutaredoxin; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase N Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase Family Protein; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Rhodanese Domain-Containing Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MGLAPRNCTSNMLLPTLYSFRRCPYAMRARLGILLSGQKVSLKEIILKHKPEPMLAASPKGTVPVLILQDGTVIEESLEI MCWALTNNDPQNLLLSHNPQQQEFAQALIHTNDHSFKPWLDKYKYADRYPEHSEQYYRQQGEQYIAQLESILSKQPQLMG HQASIADYAIFPFIRQFASVDKIWFAHSDYLNVQRWLKAHVESDDFSAIMKKYPTWLESGDSFEFGLMSN
Sequences:
>Translated_230_residues MGLAPRNCTSNMLLPTLYSFRRCPYAMRARLGILLSGQKVSLKEIILKHKPEPMLAASPKGTVPVLILQDGTVIEESLEI MCWALTNNDPQNLLLSHNPQQQEFAQALIHTNDHSFKPWLDKYKYADRYPEHSEQYYRQQGEQYIAQLESILSKQPQLMG HQASIADYAIFPFIRQFASVDKIWFAHSDYLNVQRWLKAHVESDDFSAIMKKYPTWLESGDSFEFGLMSN >Mature_229_residues GLAPRNCTSNMLLPTLYSFRRCPYAMRARLGILLSGQKVSLKEIILKHKPEPMLAASPKGTVPVLILQDGTVIEESLEIM CWALTNNDPQNLLLSHNPQQQEFAQALIHTNDHSFKPWLDKYKYADRYPEHSEQYYRQQGEQYIAQLESILSKQPQLMGH QASIADYAIFPFIRQFASVDKIWFAHSDYLNVQRWLKAHVESDDFSAIMKKYPTWLESGDSFEFGLMSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26558; Mature: 26426
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAPRNCTSNMLLPTLYSFRRCPYAMRARLGILLSGQKVSLKEIILKHKPEPMLAASPK CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHCCCCCCEECCCC GTVPVLILQDGTVIEESLEIMCWALTNNDPQNLLLSHNPQQQEFAQALIHTNDHSFKPWL CCEEEEEECCCCHHHHHHHEEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHH DKYKYADRYPEHSEQYYRQQGEQYIAQLESILSKQPQLMGHQASIADYAIFPFIRQFASV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHH DKIWFAHSDYLNVQRWLKAHVESDDFSAIMKKYPTWLESGDSFEFGLMSN HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCCCCC >Mature Secondary Structure GLAPRNCTSNMLLPTLYSFRRCPYAMRARLGILLSGQKVSLKEIILKHKPEPMLAASPK CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHCCCCCCEECCCC GTVPVLILQDGTVIEESLEIMCWALTNNDPQNLLLSHNPQQQEFAQALIHTNDHSFKPWL CCEEEEEECCCCHHHHHHHEEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHH DKYKYADRYPEHSEQYYRQQGEQYIAQLESILSKQPQLMGHQASIADYAIFPFIRQFASV HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHH DKIWFAHSDYLNVQRWLKAHVESDDFSAIMKKYPTWLESGDSFEFGLMSN HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA