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The map label for this gene is ydiA [C]

Identifier: 167623635

GI number: 167623635

Start: 2045405

End: 2046217

Strand: Reverse

Name: ydiA [C]

Synonym: Shal_1704

Alternate gene names: 167623635

Gene position: 2046217-2045405 (Counterclockwise)

Preceding gene: 167623641

Following gene: 167623634

Centisome position: 39.15

GC content: 42.31

Gene sequence:

>813_bases
ATGTTGCGTAAAGTATTTTATATCTCAGATGGGACAGCGATCACAGCTGAGGTATTCGGCCATGCGGTACTTTCTCAGTT
TCCTTTGGAATTTGATGCACTTACAATCCCGTTCGTCGAAACGGAAGCGAAAGCTGAAGCCGTTAAGGCTCAAATAAATG
ATTGTTTTATTACAACAGGTGAACGACCTCTGGTTTTCCATTCCATCGTGAAACCAGAGATCCGTGATGTCATCTATAGC
AGTGAAGGCTTAGATTACGACTTTTTGAACACTTTTGTGGCGCCATTAGAGAAACAACTAGGTATTGCTGCTACTCCTGC
AATGCATCGTACTCATGGTAAAGCCAATGAAGGTTATGAAGCACGTATCGATGCTATTAACTACGCTATGGAAAATGATG
ATGGCCAAACCATGAAACATATGGATAAAGCTGATCTGATATTATTAGGTGTGTCTCGCTGCGGTAAAACCCCGTCGAGC
CTCTACCTTTCTATGCAATTTGGTATAAAAGCGGCCAACTATCCATTTACCGAAGATGACATGGATAACTTAAAACTTCC
CGACGCCTTAAAACGTAACAAAGGTAAGTTATTTGGACTCACGATTGATCCGGAACGTCTCCATGAAATTCGCCACAGTC
GAATGTCTAACAGCCGCTATTCTTCGCTGCGTCAATGCCGTATGGAAGTTAAAGAGGTCGAAATGATGTACCAAAAAGAG
CGTATTCCTTTTGTGAACACCACCAATCACTCCGTAGAAGAGATCGCCACTAAAATCTTAGAGATCACCGGATTAAAGCG
CCATATGTTCTAA

Upstream 100 bases:

>100_bases
AATGTGGCTCTTCACACGAGAGCAACAGCATCTTACACTCCATGGCAAGAAGCGTAAATGTATAATTTTATTTGTAATTT
TATTACTACAAGAGGTCAAA

Downstream 100 bases:

>100_bases
TCTCTGTACATATTTATAGGGCCAAAATTAAAGGCTTTTAGAATAAAAGCCTTTAATTAACATCAAATAATTATCGCGAT
TGTCAAAATTAGCGTCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLRKVFYISDGTAITAEVFGHAVLSQFPLEFDALTIPFVETEAKAEAVKAQINDCFITTGERPLVFHSIVKPEIRDVIYS
SEGLDYDFLNTFVAPLEKQLGIAATPAMHRTHGKANEGYEARIDAINYAMENDDGQTMKHMDKADLILLGVSRCGKTPSS
LYLSMQFGIKAANYPFTEDDMDNLKLPDALKRNKGKLFGLTIDPERLHEIRHSRMSNSRYSSLRQCRMEVKEVEMMYQKE
RIPFVNTTNHSVEEIATKILEITGLKRHMF

Sequences:

>Translated_270_residues
MLRKVFYISDGTAITAEVFGHAVLSQFPLEFDALTIPFVETEAKAEAVKAQINDCFITTGERPLVFHSIVKPEIRDVIYS
SEGLDYDFLNTFVAPLEKQLGIAATPAMHRTHGKANEGYEARIDAINYAMENDDGQTMKHMDKADLILLGVSRCGKTPSS
LYLSMQFGIKAANYPFTEDDMDNLKLPDALKRNKGKLFGLTIDPERLHEIRHSRMSNSRYSSLRQCRMEVKEVEMMYQKE
RIPFVNTTNHSVEEIATKILEITGLKRHMF
>Mature_270_residues
MLRKVFYISDGTAITAEVFGHAVLSQFPLEFDALTIPFVETEAKAEAVKAQINDCFITTGERPLVFHSIVKPEIRDVIYS
SEGLDYDFLNTFVAPLEKQLGIAATPAMHRTHGKANEGYEARIDAINYAMENDDGQTMKHMDKADLILLGVSRCGKTPSS
LYLSMQFGIKAANYPFTEDDMDNLKLPDALKRNKGKLFGLTIDPERLHEIRHSRMSNSRYSSLRQCRMEVKEVEMMYQKE
RIPFVNTTNHSVEEIATKILEITGLKRHMF

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=271, Percent_Identity=61.6236162361624, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1704_SHEHH (B0TPZ1)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001673929.1
- GeneID:   5902993
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1704
- HOGENOM:   HBG304855
- OMA:   DAINYAM
- ProtClustDB:   PRK05339
- BioCyc:   SHAL458817:SHAL_1704-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30675; Mature: 30675

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKVFYISDGTAITAEVFGHAVLSQFPLEFDALTIPFVETEAKAEAVKAQINDCFITTG
CCEEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEEECEECCHHHHHHHHHHHCCEEEECC
ERPLVFHSIVKPEIRDVIYSSEGLDYDFLNTFVAPLEKQLGIAATPAMHRTHGKANEGYE
CCCEEHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCH
ARIDAINYAMENDDGQTMKHMDKADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTEDD
HHHHHHHHEEECCCCHHHHHCCCCCEEEEEHHHHCCCCHHEEEEEEECCEECCCCCCCCC
MDNLKLPDALKRNKGKLFGLTIDPERLHEIRHSRMSNSRYSSLRQCRMEVKEVEMMYQKE
CCCCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RIPFVNTTNHSVEEIATKILEITGLKRHMF
CCCEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRKVFYISDGTAITAEVFGHAVLSQFPLEFDALTIPFVETEAKAEAVKAQINDCFITTG
CCEEEEEEECCCEEHHHHHHHHHHHHCCCCCCEEEECEECCHHHHHHHHHHHCCEEEECC
ERPLVFHSIVKPEIRDVIYSSEGLDYDFLNTFVAPLEKQLGIAATPAMHRTHGKANEGYE
CCCEEHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCH
ARIDAINYAMENDDGQTMKHMDKADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTEDD
HHHHHHHHEEECCCCHHHHHCCCCCEEEEEHHHHCCCCHHEEEEEEECCEECCCCCCCCC
MDNLKLPDALKRNKGKLFGLTIDPERLHEIRHSRMSNSRYSSLRQCRMEVKEVEMMYQKE
CCCCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RIPFVNTTNHSVEEIATKILEITGLKRHMF
CCCEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA