Click here to switch to the map view.

The map label for this gene is 167623513

Identifier: 167623513

GI number: 167623513

Start: 1900775

End: 1901131

Strand: Reverse

Name: 167623513

Synonym: Shal_1582

Alternate gene names: NA

Gene position: 1901131-1900775 (Counterclockwise)

Preceding gene: 167623514

Following gene: 167623499

Centisome position: 36.37

GC content: 43.7

Gene sequence:

>357_bases
GTGAGTACAAACCATATCAAACAAACCTTATCCGAGATCGAGTCGGAACTAAGAGCGAAGATTGGTGCACTCCCCGAAAT
GCAAGCCAAGCTAATGGAGCAGCATAATTATTCTCTTTGTGAACTCATTCAAATCATGACTGACGTTCACTTATGCGAGC
ATCCATTATTCTTCAAATTGATGAGTCTTGATGCAACGCGTTGTCAGCTTGAGATAGGTTTGTACGGTGTGTGTAGCGAT
TGTGAGGGCCAAATTGAGCCTCAGCAGCTAGAGAAAGACCCATTAGAGCAGCGCTGTATAGGTTGTTGTGGAGAGTTTAG
TCGTCAACATAGGCAAGAGCTAAGACTTAACCACTAA

Upstream 100 bases:

>100_bases
AAATCCGCAAAATATAGCACTGAATTGATCTTAGTCATAACGCATCACGCCCGCATGTTTAGACTAAAAAGCCGTAGAGT
TAATAATTGTAGGCAACCTA

Downstream 100 bases:

>100_bases
CGCAAGCGGGATTAATATCTGGCTATCAGTATCAAAGAGTAACCCATAAAAAAACCTCCGACTTGCGGAGGTTTTTTATT
ATCTAACTAAATCAATCAAA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: DksA-Type Zinc Finger Protein; Transcriptional Regulators TraR/DksA Family Protein

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSTNHIKQTLSEIESELRAKIGALPEMQAKLMEQHNYSLCELIQIMTDVHLCEHPLFFKLMSLDATRCQLEIGLYGVCSD
CEGQIEPQQLEKDPLEQRCIGCCGEFSRQHRQELRLNH

Sequences:

>Translated_118_residues
MSTNHIKQTLSEIESELRAKIGALPEMQAKLMEQHNYSLCELIQIMTDVHLCEHPLFFKLMSLDATRCQLEIGLYGVCSD
CEGQIEPQQLEKDPLEQRCIGCCGEFSRQHRQELRLNH
>Mature_117_residues
STNHIKQTLSEIESELRAKIGALPEMQAKLMEQHNYSLCELIQIMTDVHLCEHPLFFKLMSLDATRCQLEIGLYGVCSDC
EGQIEPQQLEKDPLEQRCIGCCGEFSRQHRQELRLNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13631; Mature: 13500

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNHIKQTLSEIESELRAKIGALPEMQAKLMEQHNYSLCELIQIMTDVHLCEHPLFFKL
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
MSLDATRCQLEIGLYGVCSDCEGQIEPQQLEKDPLEQRCIGCCGEFSRQHRQELRLNH
HHCCHHHHHHHHCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STNHIKQTLSEIESELRAKIGALPEMQAKLMEQHNYSLCELIQIMTDVHLCEHPLFFKL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
MSLDATRCQLEIGLYGVCSDCEGQIEPQQLEKDPLEQRCIGCCGEFSRQHRQELRLNH
HHCCHHHHHHHHCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA