| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is suhB [H]
Identifier: 167623499
GI number: 167623499
Start: 1887487
End: 1888287
Strand: Reverse
Name: suhB [H]
Synonym: Shal_1568
Alternate gene names: 167623499
Gene position: 1888287-1887487 (Counterclockwise)
Preceding gene: 167623513
Following gene: 167623498
Centisome position: 36.13
GC content: 45.82
Gene sequence:
>801_bases ATGCTTCCAATGCATACCATTGCTGTGCGCGCTGCTCGCGCTGCCGGCCAAACTATTGTACGCGCCTATGCGGAACTAGA CCGTATAGAAGTCACCTCTAAAGGTGTTAACGACTACGTAAGTAACGTAGACAAGGAAGCTGAAGCTGCAATCACGTATC AGATCCGTAAGGCTTACCCAGACCACACTATTATTGGTGAAGAGACTGGTGAGAACAAAGGAACTAACAAAGATTACGTA TGGATTGTCGACCCTCTGGATGGCACTAATAACTTCGTAAGAGGTATTCCTCACTTTGCTGTATCTATTGCGATGCAGTT CAAAGGTAAAACCGAAGTCGCTGTTGTTTACGATCCTATTCGCGACGAGTTGTTCTCTGCTGTTCGTGGTAAATTCGCTA AACTTAACGATTTCCGCATCCGTGTTAAGAGCAAAGAGTTAAGCGAAACCATCATCGGCACTGGCTTCCCATTCAAAGCT AAGCAACACACTGAAACTTACATGAAGTTGTTTGCAGCAGCATTTACTCAGTCTGCGGACTTACGTCGCGCTGGTTCTGC AGCTCTTGATCTTGCTTACCTTGCTGCTGGCCGTTTAGATGGTTTCTTTGAAATTGGTCTAAAGCCGTGGGATATCGCTG CTGGCGATCTGATCGTACGTGAAGCTGGCGGTACTGTTACTGACTTTACTGGTAACCACAACTACCTAGTGTCAGGTAAC ATTGTTGCTGGTTCTCCAAAGATAACAACAGCACTTGTTAAGACATTCCGCCCACTATTGAGCGAAGCACTTAAACGTTA A
Upstream 100 bases:
>100_bases TTTTGCTTATACAAAAATCAGCATTTGATATAACCGTCAAATCGGGTATAATCCGCCTCCGATAATTTATATCCGTTCTT TTACATCCAGGGGATTTGCA
Downstream 100 bases:
>100_bases TCTGTTTAAGTTGACGATAATAACCGCCTATTAAGGCGGTTTTTTTATGCCTAAAATTCAAAACTGACAGTAATGCTCTA AACTCTTATTACCTAAGAAA
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLPMHTIAVRAARAAGQTIVRAYAELDRIEVTSKGVNDYVSNVDKEAEAAITYQIRKAYPDHTIIGEETGENKGTNKDYV WIVDPLDGTNNFVRGIPHFAVSIAMQFKGKTEVAVVYDPIRDELFSAVRGKFAKLNDFRIRVKSKELSETIIGTGFPFKA KQHTETYMKLFAAAFTQSADLRRAGSAALDLAYLAAGRLDGFFEIGLKPWDIAAGDLIVREAGGTVTDFTGNHNYLVSGN IVAGSPKITTALVKTFRPLLSEALKR
Sequences:
>Translated_266_residues MLPMHTIAVRAARAAGQTIVRAYAELDRIEVTSKGVNDYVSNVDKEAEAAITYQIRKAYPDHTIIGEETGENKGTNKDYV WIVDPLDGTNNFVRGIPHFAVSIAMQFKGKTEVAVVYDPIRDELFSAVRGKFAKLNDFRIRVKSKELSETIIGTGFPFKA KQHTETYMKLFAAAFTQSADLRRAGSAALDLAYLAAGRLDGFFEIGLKPWDIAAGDLIVREAGGTVTDFTGNHNYLVSGN IVAGSPKITTALVKTFRPLLSEALKR >Mature_266_residues MLPMHTIAVRAARAAGQTIVRAYAELDRIEVTSKGVNDYVSNVDKEAEAAITYQIRKAYPDHTIIGEETGENKGTNKDYV WIVDPLDGTNNFVRGIPHFAVSIAMQFKGKTEVAVVYDPIRDELFSAVRGKFAKLNDFRIRVKSKELSETIIGTGFPFKA KQHTETYMKLFAAAFTQSADLRRAGSAALDLAYLAAGRLDGFFEIGLKPWDIAAGDLIVREAGGTVTDFTGNHNYLVSGN IVAGSPKITTALVKTFRPLLSEALKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=250, Percent_Identity=32, Blast_Score=134, Evalue=6e-32, Organism=Homo sapiens, GI221625487, Length=250, Percent_Identity=32, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI7657236, Length=255, Percent_Identity=33.7254901960784, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI221625507, Length=142, Percent_Identity=35.2112676056338, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=60.2996254681648, Blast_Score=345, Evalue=1e-96, Organism=Escherichia coli, GI1790659, Length=128, Percent_Identity=33.59375, Blast_Score=71, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193202572, Length=235, Percent_Identity=33.1914893617021, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI193202570, Length=236, Percent_Identity=32.2033898305085, Blast_Score=117, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=204, Percent_Identity=37.2549019607843, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=31.8627450980392, Blast_Score=105, Evalue=9e-24, Organism=Drosophila melanogaster, GI21357329, Length=266, Percent_Identity=34.5864661654135, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24664926, Length=201, Percent_Identity=37.3134328358209, Blast_Score=133, Evalue=9e-32, Organism=Drosophila melanogaster, GI24664922, Length=233, Percent_Identity=33.9055793991416, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI21357303, Length=250, Percent_Identity=32, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI21357957, Length=264, Percent_Identity=32.5757575757576, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24664918, Length=273, Percent_Identity=31.5018315018315, Blast_Score=114, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29177; Mature: 29177
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPMHTIAVRAARAAGQTIVRAYAELDRIEVTSKGVNDYVSNVDKEAEAAITYQIRKAYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHCCCCHHHHHEEEEEHHCCC DHTIIGEETGENKGTNKDYVWIVDPLDGTNNFVRGIPHFAVSIAMQFKGKTEVAVVYDPI CCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHHEEEEEEECCCCEEEEEECCH RDELFSAVRGKFAKLNDFRIRVKSKELSETIIGTGFPFKAKQHTETYMKLFAAAFTQSAD HHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHH LRRAGSAALDLAYLAAGRLDGFFEIGLKPWDIAAGDLIVREAGGTVTDFTGNHNYLVSGN HHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC IVAGSPKITTALVKTFRPLLSEALKR EEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPMHTIAVRAARAAGQTIVRAYAELDRIEVTSKGVNDYVSNVDKEAEAAITYQIRKAYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHCCCCHHHHHEEEEEHHCCC DHTIIGEETGENKGTNKDYVWIVDPLDGTNNFVRGIPHFAVSIAMQFKGKTEVAVVYDPI CCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHHEEEEEEECCCCEEEEEECCH RDELFSAVRGKFAKLNDFRIRVKSKELSETIIGTGFPFKAKQHTETYMKLFAAAFTQSAD HHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHH LRRAGSAALDLAYLAAGRLDGFFEIGLKPWDIAAGDLIVREAGGTVTDFTGNHNYLVSGN HHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCEEEECC IVAGSPKITTALVKTFRPLLSEALKR EEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]