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The map label for this gene is epsJ [H]

Identifier: 167623439

GI number: 167623439

Start: 1815775

End: 1816884

Strand: Reverse

Name: epsJ [H]

Synonym: Shal_1508

Alternate gene names: 167623439

Gene position: 1816884-1815775 (Counterclockwise)

Preceding gene: 167623440

Following gene: 167623438

Centisome position: 34.76

GC content: 43.87

Gene sequence:

>1110_bases
ATGACTGCTAATTTATCCCACAAAAAAGTCGTAACGGTAAAGGTTTCGGTAGTGATGCCTATCTATAATGTTGAAGCTTT
TGTTGCTGATGCCATTAACTCTGTACTGGCTCAAAGTTTTGATGATTTTGAACTAATCCTCATTAATGATTGCTCCCAAG
ATAACAGCTTATCTATCTGCAAACAATTTACTGATCCAAGAGTTAGGATTATTGAGCATCAGCAGAACCAAGGCCTCGCA
GCGGCGCGAAATACTGGCATTCGCCATGCCCTTGGTCAATATGTGGCCTTTATCGATTCTGATGACATGTGGCACAGCGA
AAAATTACAGCAACATGTAAGCCATCTCGACAACGCTCCAGAAGTGGGAATTAGCTTCTCACGGTCGCTATTTATGAATT
ACCAAGGGCAAAAGATTAATGTCTATCAAATGCCGCAGCTCACTAACATCAAGGCAAAAGATCTGCTTTGCCGCAACCCT
GTCGGTAATGGTTCCGCTCCGGTTATTCGCCACGAAACGCTATCAGACATTCAATATCAATCACCGAGCAAAGGGCTGGC
ATCAAGCAAGAGCCAAGCATTAAATAAAAGCAATGCACACAACTGCTACTTCGACGAAAATTTTCGCCAATCAGAAGATA
TTGAATGCTGGCTAAGGATAGTAACCACCACTCATTGGAAAATTGAGGGGATCCCCGCACCTCTGACCTTCTATCGATTA
AATGACCAAGGCCTATCATCGGATCTTAATAAGCAATATGCCTCGTGGGAAAAGATGATTTGTAAGGCCAAAGGCTATGC
GCCAGAACTATTGGCACAACATGAAAACAAAGCAAGAGCCTACCAACTCAGGTACATTGCTAGACAAGCCATTCGAAACA
AAGATGGAAAAGAGGCGGTTAAATATCTGCATCTTGCACTGAAAACCGCCCCAAGCATCATTCAAGCTGAAACCGGACGA
ACCCTAGCGACGATGTCGGCCGCTTACCTGTTAAAGCTACTGCCACTTAACCTCTATAGGGTTTGCGAAGATCTAGCTCA
ACGAATTCTCGGACGGATCCAAGCTAGCAAGATAAACCGGGATGGTGTTGATCCTACACTACTAAAGTAA

Upstream 100 bases:

>100_bases
ATCTTACTATCACACCTATTGGTGATGCCAAGTTTCACACTCTACTTAAAGTTGACCCAATCTATTACAGACAAGCCCCA
TTGTCGCTCGGAGGTACATT

Downstream 100 bases:

>100_bases
CAATTTGAGCCTTACCCCTGAGTCATTTGCAGCCTGCCTTGCAAGATGCAAATGGCTAGTCACTACATAACAAACCATCC
CCAGACCACGCGTAACACAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTANLSHKKVVTVKVSVVMPIYNVEAFVADAINSVLAQSFDDFELILINDCSQDNSLSICKQFTDPRVRIIEHQQNQGLA
AARNTGIRHALGQYVAFIDSDDMWHSEKLQQHVSHLDNAPEVGISFSRSLFMNYQGQKINVYQMPQLTNIKAKDLLCRNP
VGNGSAPVIRHETLSDIQYQSPSKGLASSKSQALNKSNAHNCYFDENFRQSEDIECWLRIVTTTHWKIEGIPAPLTFYRL
NDQGLSSDLNKQYASWEKMICKAKGYAPELLAQHENKARAYQLRYIARQAIRNKDGKEAVKYLHLALKTAPSIIQAETGR
TLATMSAAYLLKLLPLNLYRVCEDLAQRILGRIQASKINRDGVDPTLLK

Sequences:

>Translated_369_residues
MTANLSHKKVVTVKVSVVMPIYNVEAFVADAINSVLAQSFDDFELILINDCSQDNSLSICKQFTDPRVRIIEHQQNQGLA
AARNTGIRHALGQYVAFIDSDDMWHSEKLQQHVSHLDNAPEVGISFSRSLFMNYQGQKINVYQMPQLTNIKAKDLLCRNP
VGNGSAPVIRHETLSDIQYQSPSKGLASSKSQALNKSNAHNCYFDENFRQSEDIECWLRIVTTTHWKIEGIPAPLTFYRL
NDQGLSSDLNKQYASWEKMICKAKGYAPELLAQHENKARAYQLRYIARQAIRNKDGKEAVKYLHLALKTAPSIIQAETGR
TLATMSAAYLLKLLPLNLYRVCEDLAQRILGRIQASKINRDGVDPTLLK
>Mature_368_residues
TANLSHKKVVTVKVSVVMPIYNVEAFVADAINSVLAQSFDDFELILINDCSQDNSLSICKQFTDPRVRIIEHQQNQGLAA
ARNTGIRHALGQYVAFIDSDDMWHSEKLQQHVSHLDNAPEVGISFSRSLFMNYQGQKINVYQMPQLTNIKAKDLLCRNPV
GNGSAPVIRHETLSDIQYQSPSKGLASSKSQALNKSNAHNCYFDENFRQSEDIECWLRIVTTTHWKIEGIPAPLTFYRLN
DQGLSSDLNKQYASWEKMICKAKGYAPELLAQHENKARAYQLRYIARQAIRNKDGKEAVKYLHLALKTAPSIIQAETGRT
LATMSAAYLLKLLPLNLYRVCEDLAQRILGRIQASKINRDGVDPTLLK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=93, Percent_Identity=44.0860215053763, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788372, Length=105, Percent_Identity=35.2380952380952, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787259, Length=111, Percent_Identity=32.4324324324324, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41622; Mature: 41491

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANLSHKKVVTVKVSVVMPIYNVEAFVADAINSVLAQSFDDFELILINDCSQDNSLSIC
CCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH
KQFTDPRVRIIEHQQNQGLAAARNTGIRHALGQYVAFIDSDDMWHSEKLQQHVSHLDNAP
HHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCC
EVGISFSRSLFMNYQGQKINVYQMPQLTNIKAKDLLCRNPVGNGSAPVIRHETLSDIQYQ
CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEECCHHHHCCCC
SPSKGLASSKSQALNKSNAHNCYFDENFRQSEDIECWLRIVTTTHWKIEGIPAPLTFYRL
CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEE
NDQGLSSDLNKQYASWEKMICKAKGYAPELLAQHENKARAYQLRYIARQAIRNKDGKEAV
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
KYLHLALKTAPSIIQAETGRTLATMSAAYLLKLLPLNLYRVCEDLAQRILGRIQASKINR
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVDPTLLK
CCCCCCCCC
>Mature Secondary Structure 
TANLSHKKVVTVKVSVVMPIYNVEAFVADAINSVLAQSFDDFELILINDCSQDNSLSIC
CCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH
KQFTDPRVRIIEHQQNQGLAAARNTGIRHALGQYVAFIDSDDMWHSEKLQQHVSHLDNAP
HHCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCC
EVGISFSRSLFMNYQGQKINVYQMPQLTNIKAKDLLCRNPVGNGSAPVIRHETLSDIQYQ
CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEECCHHHHCCCC
SPSKGLASSKSQALNKSNAHNCYFDENFRQSEDIECWLRIVTTTHWKIEGIPAPLTFYRL
CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCEEEEEE
NDQGLSSDLNKQYASWEKMICKAKGYAPELLAQHENKARAYQLRYIARQAIRNKDGKEAV
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH
KYLHLALKTAPSIIQAETGRTLATMSAAYLLKLLPLNLYRVCEDLAQRILGRIQASKINR
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVDPTLLK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]