Click here to switch to the map view.

The map label for this gene is cpsE [H]

Identifier: 167623438

GI number: 167623438

Start: 1813388

End: 1815556

Strand: Reverse

Name: cpsE [H]

Synonym: Shal_1507

Alternate gene names: 167623438

Gene position: 1815556-1813388 (Counterclockwise)

Preceding gene: 167623439

Following gene: 167623437

Centisome position: 34.73

GC content: 45.18

Gene sequence:

>2169_bases
ATGATGAAAAATACCAACTTGAATGCCGACTCGAATACAGACTCAAGTATAGAGTCGAATATAGAGTCGAGTACCCAAGC
CGCTCATTGTGGCCAGTCATGTTTCAGCATTCGCTGCTTCGACTTTACCTGCGCCCTATTGATGCTGCTACTGAGCTCTC
CGTTTATCTTATATGGGTACCTTAAGAGTGCGTTCACACAATCTAGCGCATTTGAAACTGTGTATATTCATGGCGTTAAC
CATAAGATCATAGGGTTGAAGCAGCTCTCCTATTCGGGATGGTTCAAACAGTTGCCAGTATTGCTAAACCTATTAAACGG
AGAGCTTTCGATTCTAGGTACTGAGCAGAAATTTGCACTAACAAAAGATAGCGAACATGACAGCAGCTCCGCGAATAAAG
CGGTAATCGATAGTGACACAGCCACCCGCAATGATGCTAAAGCTTCAGCCAAAACGGTCTACTCCATTAAGCCTGGCTTG
ACCTCTATTGAAAAGATGAACGCCGCGACGGGTCTACAATTTGAGCTGGCATCTAACTCACTCGACAAAGCGCACCGCAG
CCTAGTCCGCTACCTACTCGCCCTACTTAGACTAACAATTGTATTTACCGTCACAGGGATCGCTTTTTCCAAACCTCGCA
GGCATGACCCAAAGATCTCGGTATTTGGCATCAGCATCGATAACTGGAGCATGACGCAACTGTTAGATGAGATATTACTG
CAGTGTCAGCATGAACCACAGCCTATGCAGCAGTACGCCTTTATCAACACTGATTGCCTCAATATCAGTATTCAAGACGA
GTCTTACCGTCAGTGCTTACAACAGAGTAAGCATATTTTCGCCGATGGCATAGGCGTACGCTTAGCCTGCCTAAGCAAGG
GCAAAGGCCTGCAAGATAACCTAAATGGCACCGATATGTTTCCGCGCCTGTGTGAGCTTGCATCAAAGAATAATCTATCC
ATCTTTATGTTAGGTGGCAGTGATAACGTTGCTCAATCAGCCGCAAGCAACATGCAAAATCGTTATCAAGACCTCAAGAT
TGCCGGCTGTCACTCAGGCTATTTCAATAGCGAGACAAACAGCGACGAAAATCAAGGTGTCATAGATATAATCAATCAGT
CAAATGCCGATATATTATTGGTGGCAATGGGAGCACCAAAGCAAGAGTTATGGCTTGCGGCCAATAAGCAAAAACTAACC
TGCTCGGTAGGGGTTGGAGTTGGCGGCCTTTTCGATTTTTACGCCAATCGCATTAAGCGTGCGCCACTATGGTTAAGACA
GATAGGCTTTGAATGGAGTTACCGTTTACTGCAAGAGCCAAAAAGAATGTGGAAACGCTATATACTCGGCAACCCAAGTT
TTCTATATCGTGTGTGGCGCGAAAACTGTCAGCTAAAGACTGTGCATGTCAATCAACAAGCATCTGGCGCGAGAAACGAT
GCCAAGCTAACAAAGTTACAGCTTCAAACTGAGCTTAATAAGGCAACCATTAAAAACCGAAAACTGCCACAGTTTGATGC
TAATCAAGCCAACCTTCGCCGAGCAATGTTCAACATAAACAAGCGTATAAGCCAAAGCTGTAAACGTTTGCTCGATATTC
TAATTTCAGGTTCTCTTTTAATCGCATTAGCCCCTTTTCTAATCGTTATAGCGCTACTGATCCGCTGTGAGTCTAAAGGT
GCGGTACTGTTTTGCCAGCCCCGCGCGGGCCTTAATAATCGCCCATTTACCATGTGGAAATTTCACTCTATGTATCACGA
TGCCGAACAGCGACTCGCCACATTGAACGTGAAAAACGAAATGGAGGGCGGGGTTATTTTTAAGATAAAGAATGATCCAA
GGATCACCTTAGTCGGGCGTTTGATCCGTAAGACCTCAATCGATGAGTTACCCCAGTTATGGAATGTACTAAAAGGCGAC
ATGTCGTTAGTCGGCCCCCGCCCAGCATTGGTGAGCGAAGTCAAACAGTACAATGTTCATCATCGAGGCCGCTTAATGAT
AAAACCTGGGATCACCTGTATTTGGCAAGTATCCGGACGTTCAACTATCCCATTTGAGCAACAAGTTGAACTCGACATTG
ACTATATCTATCAGCAATCGTTCACAGCCGATCTTCTATTGTTACTGAAGACCATTCCCGCGGTTATTTTTGCCCGTGGC
GCGTATTAA

Upstream 100 bases:

>100_bases
AAACTGGCCTGGTATATGCTAGTTAAAGATTAAGCATTAAGACAATAGGTCTTAAACAATAAGCCTTAAACAATAAGCCT
TAACTTTTAGCAGGGACTCA

Downstream 100 bases:

>100_bases
GGAGTTGCATATGCAAGCGATTATTTTTGCAAATCGTGATGGTAATGAATTAGCGCCACTGAATCGCTATTACTGCCCAG
CATTATTGCCTGTCAGCAAT

Product: WecB/TagA/CpsF family glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MMKNTNLNADSNTDSSIESNIESSTQAAHCGQSCFSIRCFDFTCALLMLLLSSPFILYGYLKSAFTQSSAFETVYIHGVN
HKIIGLKQLSYSGWFKQLPVLLNLLNGELSILGTEQKFALTKDSEHDSSSANKAVIDSDTATRNDAKASAKTVYSIKPGL
TSIEKMNAATGLQFELASNSLDKAHRSLVRYLLALLRLTIVFTVTGIAFSKPRRHDPKISVFGISIDNWSMTQLLDEILL
QCQHEPQPMQQYAFINTDCLNISIQDESYRQCLQQSKHIFADGIGVRLACLSKGKGLQDNLNGTDMFPRLCELASKNNLS
IFMLGGSDNVAQSAASNMQNRYQDLKIAGCHSGYFNSETNSDENQGVIDIINQSNADILLVAMGAPKQELWLAANKQKLT
CSVGVGVGGLFDFYANRIKRAPLWLRQIGFEWSYRLLQEPKRMWKRYILGNPSFLYRVWRENCQLKTVHVNQQASGARND
AKLTKLQLQTELNKATIKNRKLPQFDANQANLRRAMFNINKRISQSCKRLLDILISGSLLIALAPFLIVIALLIRCESKG
AVLFCQPRAGLNNRPFTMWKFHSMYHDAEQRLATLNVKNEMEGGVIFKIKNDPRITLVGRLIRKTSIDELPQLWNVLKGD
MSLVGPRPALVSEVKQYNVHHRGRLMIKPGITCIWQVSGRSTIPFEQQVELDIDYIYQQSFTADLLLLLKTIPAVIFARG
AY

Sequences:

>Translated_722_residues
MMKNTNLNADSNTDSSIESNIESSTQAAHCGQSCFSIRCFDFTCALLMLLLSSPFILYGYLKSAFTQSSAFETVYIHGVN
HKIIGLKQLSYSGWFKQLPVLLNLLNGELSILGTEQKFALTKDSEHDSSSANKAVIDSDTATRNDAKASAKTVYSIKPGL
TSIEKMNAATGLQFELASNSLDKAHRSLVRYLLALLRLTIVFTVTGIAFSKPRRHDPKISVFGISIDNWSMTQLLDEILL
QCQHEPQPMQQYAFINTDCLNISIQDESYRQCLQQSKHIFADGIGVRLACLSKGKGLQDNLNGTDMFPRLCELASKNNLS
IFMLGGSDNVAQSAASNMQNRYQDLKIAGCHSGYFNSETNSDENQGVIDIINQSNADILLVAMGAPKQELWLAANKQKLT
CSVGVGVGGLFDFYANRIKRAPLWLRQIGFEWSYRLLQEPKRMWKRYILGNPSFLYRVWRENCQLKTVHVNQQASGARND
AKLTKLQLQTELNKATIKNRKLPQFDANQANLRRAMFNINKRISQSCKRLLDILISGSLLIALAPFLIVIALLIRCESKG
AVLFCQPRAGLNNRPFTMWKFHSMYHDAEQRLATLNVKNEMEGGVIFKIKNDPRITLVGRLIRKTSIDELPQLWNVLKGD
MSLVGPRPALVSEVKQYNVHHRGRLMIKPGITCIWQVSGRSTIPFEQQVELDIDYIYQQSFTADLLLLLKTIPAVIFARG
AY
>Mature_722_residues
MMKNTNLNADSNTDSSIESNIESSTQAAHCGQSCFSIRCFDFTCALLMLLLSSPFILYGYLKSAFTQSSAFETVYIHGVN
HKIIGLKQLSYSGWFKQLPVLLNLLNGELSILGTEQKFALTKDSEHDSSSANKAVIDSDTATRNDAKASAKTVYSIKPGL
TSIEKMNAATGLQFELASNSLDKAHRSLVRYLLALLRLTIVFTVTGIAFSKPRRHDPKISVFGISIDNWSMTQLLDEILL
QCQHEPQPMQQYAFINTDCLNISIQDESYRQCLQQSKHIFADGIGVRLACLSKGKGLQDNLNGTDMFPRLCELASKNNLS
IFMLGGSDNVAQSAASNMQNRYQDLKIAGCHSGYFNSETNSDENQGVIDIINQSNADILLVAMGAPKQELWLAANKQKLT
CSVGVGVGGLFDFYANRIKRAPLWLRQIGFEWSYRLLQEPKRMWKRYILGNPSFLYRVWRENCQLKTVHVNQQASGARND
AKLTKLQLQTELNKATIKNRKLPQFDANQANLRRAMFNINKRISQSCKRLLDILISGSLLIALAPFLIVIALLIRCESKG
AVLFCQPRAGLNNRPFTMWKFHSMYHDAEQRLATLNVKNEMEGGVIFKIKNDPRITLVGRLIRKTSIDELPQLWNVLKGD
MSLVGPRPALVSEVKQYNVHHRGRLMIKPGITCIWQVSGRSTIPFEQQVELDIDYIYQQSFTADLLLLLKTIPAVIFARG
AY

Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=208, Percent_Identity=34.6153846153846, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI2367289, Length=230, Percent_Identity=28.695652173913, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 81076; Mature: 81076

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNTNLNADSNTDSSIESNIESSTQAAHCGQSCFSIRCFDFTCALLMLLLSSPFILYGY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHCCCHHHHHH
LKSAFTQSSAFETVYIHGVNHKIIGLKQLSYSGWFKQLPVLLNLLNGELSILGTEQKFAL
HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCEEEE
TKDSEHDSSSANKAVIDSDTATRNDAKASAKTVYSIKPGLTSIEKMNAATGLQFELASNS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEECCCH
LDKAHRSLVRYLLALLRLTIVFTVTGIAFSKPRRHDPKISVFGISIDNWSMTQLLDEILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHH
QCQHEPQPMQQYAFINTDCLNISIQDESYRQCLQQSKHIFADGIGVRLACLSKGKGLQDN
HCCCCCCHHHHHEEEECEEEEEEECCHHHHHHHHHCCCEECCCCCEEEEEECCCCCCCCC
LNGTDMFPRLCELASKNNLSIFMLGGSDNVAQSAASNMQNRYQDLKIAGCHSGYFNSETN
CCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC
SDENQGVIDIINQSNADILLVAMGAPKQELWLAANKQKLTCSVGVGVGGLFDFYANRIKR
CCCCCCEEEEECCCCCCEEEEEECCCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHC
APLWLRQIGFEWSYRLLQEPKRMWKRYILGNPSFLYRVWRENCQLKTVHVNQQASGARND
CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC
AKLTKLQLQTELNKATIKNRKLPQFDANQANLRRAMFNINKRISQSCKRLLDILISGSLL
CHHHEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IALAPFLIVIALLIRCESKGAVLFCQPRAGLNNRPFTMWKFHSMYHDAEQRLATLNVKNE
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHEEECCCCC
MEGGVIFKIKNDPRITLVGRLIRKTSIDELPQLWNVLKGDMSLVGPRPALVSEVKQYNVH
CCCCEEEEECCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCC
HRGRLMIKPGITCIWQVSGRSTIPFEQQVELDIDYIYQQSFTADLLLLLKTIPAVIFARG
CCCEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCC
AY
CC
>Mature Secondary Structure
MMKNTNLNADSNTDSSIESNIESSTQAAHCGQSCFSIRCFDFTCALLMLLLSSPFILYGY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHCCCHHHHHH
LKSAFTQSSAFETVYIHGVNHKIIGLKQLSYSGWFKQLPVLLNLLNGELSILGTEQKFAL
HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCEEEE
TKDSEHDSSSANKAVIDSDTATRNDAKASAKTVYSIKPGLTSIEKMNAATGLQFELASNS
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEECCCH
LDKAHRSLVRYLLALLRLTIVFTVTGIAFSKPRRHDPKISVFGISIDNWSMTQLLDEILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHH
QCQHEPQPMQQYAFINTDCLNISIQDESYRQCLQQSKHIFADGIGVRLACLSKGKGLQDN
HCCCCCCHHHHHEEEECEEEEEEECCHHHHHHHHHCCCEECCCCCEEEEEECCCCCCCCC
LNGTDMFPRLCELASKNNLSIFMLGGSDNVAQSAASNMQNRYQDLKIAGCHSGYFNSETN
CCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCC
SDENQGVIDIINQSNADILLVAMGAPKQELWLAANKQKLTCSVGVGVGGLFDFYANRIKR
CCCCCCEEEEECCCCCCEEEEEECCCCHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHC
APLWLRQIGFEWSYRLLQEPKRMWKRYILGNPSFLYRVWRENCQLKTVHVNQQASGARND
CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC
AKLTKLQLQTELNKATIKNRKLPQFDANQANLRRAMFNINKRISQSCKRLLDILISGSLL
CHHHEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IALAPFLIVIALLIRCESKGAVLFCQPRAGLNNRPFTMWKFHSMYHDAEQRLATLNVKNE
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHEEECCCCC
MEGGVIFKIKNDPRITLVGRLIRKTSIDELPQLWNVLKGDMSLVGPRPALVSEVKQYNVH
CCCCEEEEECCCCCEEHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCC
HRGRLMIKPGITCIWQVSGRSTIPFEQQVELDIDYIYQQSFTADLLLLLKTIPAVIFARG
CCCEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCC
AY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8355611; 10913080; 11773119; 12354221 [H]