Click here to switch to the map view.

The map label for this gene is 167623388

Identifier: 167623388

GI number: 167623388

Start: 1755245

End: 1755616

Strand: Direct

Name: 167623388

Synonym: Shal_1457

Alternate gene names: NA

Gene position: 1755245-1755616 (Clockwise)

Preceding gene: 167623387

Following gene: 167623389

Centisome position: 33.58

GC content: 46.51

Gene sequence:

>372_bases
ATGAGCTTTCAACTGGTTTTAGCCGGTGTGAGTAGTGCGGCAGCGCAAGCTGAAACGCCTGCTTCACCAACGAGTATCGC
AACGTTATCGAGCATGGTTGGTGGCTTGATTTTAGTATTACTACTGATTTTCTTTCTAGCCTATCTAGTCAAACGCTTAA
ACTTAGTCCCCAGTAGCCAAGGGGAATTAAAAACCCTCGCAGTGACGCCTTTAGGACAAAAAGAGAAGTTAGTACTGGTT
GAGGTTGCAGGTCAGCAATACTTGCTTGGGGTTACGCCGCAGCAAGTGAGCCTAGTTGATAAATTAACCCAACCAGTGGA
AATATCGTCTGAGTCATTTGCCAGCCGCCTTCGTCAAGCAAAGGCATCATGA

Upstream 100 bases:

>100_bases
TGGTGAGGTGGTTGTGGTAAACGATAAATTTGGTATTCGTCTAACGGATGTCATTAGCCAAACTGAGCGAATTAAAAAGC
TGAAGTAAAAGGGACGTTTA

Downstream 100 bases:

>100_bases
TGAAGTGGATTTTACTGCTAGCCGGATTGGCTCTGACTTTTATGGCGCCAACCGCGCTCGCAGAAAACGGTATTCTGCCA
GCTGTGACGGTTTCGACTGG

Product: flagellar biosynthesis protein FliO

Products: NA

Alternate protein names: Flagellar Protein FliO; Flagellar Biosynthetic Protein FliO

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSFQLVLAGVSSAAAQAETPASPTSIATLSSMVGGLILVLLLIFFLAYLVKRLNLVPSSQGELKTLAVTPLGQKEKLVLV
EVAGQQYLLGVTPQQVSLVDKLTQPVEISSESFASRLRQAKAS

Sequences:

>Translated_123_residues
MSFQLVLAGVSSAAAQAETPASPTSIATLSSMVGGLILVLLLIFFLAYLVKRLNLVPSSQGELKTLAVTPLGQKEKLVLV
EVAGQQYLLGVTPQQVSLVDKLTQPVEISSESFASRLRQAKAS
>Mature_122_residues
SFQLVLAGVSSAAAQAETPASPTSIATLSSMVGGLILVLLLIFFLAYLVKRLNLVPSSQGELKTLAVTPLGQKEKLVLVE
VAGQQYLLGVTPQQVSLVDKLTQPVEISSESFASRLRQAKAS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12968; Mature: 12837

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQLVLAGVSSAAAQAETPASPTSIATLSSMVGGLILVLLLIFFLAYLVKRLNLVPSSQ
CCEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GELKTLAVTPLGQKEKLVLVEVAGQQYLLGVTPQQVSLVDKLTQPVEISSESFASRLRQA
CCEEEEEECCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KAS
CCC
>Mature Secondary Structure 
SFQLVLAGVSSAAAQAETPASPTSIATLSSMVGGLILVLLLIFFLAYLVKRLNLVPSSQ
CEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GELKTLAVTPLGQKEKLVLVEVAGQQYLLGVTPQQVSLVDKLTQPVEISSESFASRLRQA
CCEEEEEECCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KAS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA