| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fliG [H]
Identifier: 167623380
GI number: 167623380
Start: 1747538
End: 1748584
Strand: Direct
Name: fliG [H]
Synonym: Shal_1449
Alternate gene names: 167623380
Gene position: 1747538-1748584 (Clockwise)
Preceding gene: 167623379
Following gene: 167623381
Centisome position: 33.43
GC content: 45.94
Gene sequence:
>1047_bases ATGACAAATGATATTAGTGTAGAAGCGAAAACGGCGCCTGGATTTAAGCCCAGTGAATTAAATGGCATCGAGAAAACGGC CATTTTACTGTTAAGCTTGAGTGAAAGTGATGCGGCATCCATTTTAAAGTATCTAGAGCCAAAGCAAGTCCAAAAAGTGG GTATGGCCATGGCAGCGATGAGAGACTTTGGCCAAGAAAAGGTCATTGGCGTTCATAAGCTGTTTTTAGATGATATCCAA AAGTATTCATCGATCGGTTTTAATAGCGAAGAGTTTGTTCGTAAGGCGCTAACAGCCGCACTCGGTGAAGACAAAGCGGG CAACCTAATCGAACAGATTATTATGGGAAGCGGCGCGAAAGGTCTCGATTCACTCAAGTGGATGGATGCACGTCAAGTCG CAACCATCATCCAAAATGAACATCCACAAATTCAAACAATTGTATTATCTTATCTAGAGCCCGACCAAGCGGCAGAAATT TTTGCTCAATTCCCAGAAAATACACGTTTAGATCTGATGATGCGTATCGCTAACCTTGAAGAAGTTCAGCCAGCCGCTTT GCAAGAGCTTAACGACATCATGGAGAAACAGTTCGCCGGTCAAGGCGGCGCGCAGGCAGCCAAGATGGGTGGTTTGAAAG CGGCTGCCAATATCATGAACTACCTCGATACTGGAGTCGAGAGCCACTTAATGGAGACGATGCGTGAATCTGACGAAGAG ATGGCGCAACAGATCCAAGACTTGATGTTCGTATTTGAAAACCTAAGTGATGTCGATGATATGGGTATTCAGGTCTTGCT GCGAGAAGTACAGCAGGATGTGTTAATGAAGGCACTTAAGGGTGCCGATGAGCAGCTCAAAGAGAAGCTTCTTGGTAACA TGTCTAAGCGCGCAGCAGAGCTACTTCGAGATGATTTAGAAGCCATGGGACCCATCAGAATTAGTGAAGTTGAAGTTGCT CAGAAAGAGATCTTATCGATTGCTCGTCGCTTGAGCGACAGCGGAGAGATCATGCTGGGCGGCGGAGGCGGTGAAGAGTT CCTATAA
Upstream 100 bases:
>100_bases AACCTGCATAAAGATGATGATATGATCAAAGCGATCCGCGCACTGGTGGCTAATGAGCCTGAACTATCGACGCAAGTTGT GAAAAACTGGTTACTTGAAG
Downstream 100 bases:
>100_bases TGACTGAACCTAAAGAGCCAAAAGGCGCCAGCGTGAATACCCATGATGAGTTTTCCCATTGGGATTTGCCTGATATTAGC CAAGAGAAAAATCCATCTCT
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTNDISVEAKTAPGFKPSELNGIEKTAILLLSLSESDAASILKYLEPKQVQKVGMAMAAMRDFGQEKVIGVHKLFLDDIQ KYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEI FAQFPENTRLDLMMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESHLMETMRESDEE MAQQIQDLMFVFENLSDVDDMGIQVLLREVQQDVLMKALKGADEQLKEKLLGNMSKRAAELLRDDLEAMGPIRISEVEVA QKEILSIARRLSDSGEIMLGGGGGEEFL
Sequences:
>Translated_348_residues MTNDISVEAKTAPGFKPSELNGIEKTAILLLSLSESDAASILKYLEPKQVQKVGMAMAAMRDFGQEKVIGVHKLFLDDIQ KYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEI FAQFPENTRLDLMMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESHLMETMRESDEE MAQQIQDLMFVFENLSDVDDMGIQVLLREVQQDVLMKALKGADEQLKEKLLGNMSKRAAELLRDDLEAMGPIRISEVEVA QKEILSIARRLSDSGEIMLGGGGGEEFL >Mature_347_residues TNDISVEAKTAPGFKPSELNGIEKTAILLLSLSESDAASILKYLEPKQVQKVGMAMAAMRDFGQEKVIGVHKLFLDDIQK YSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIF AQFPENTRLDLMMRIANLEEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESHLMETMRESDEEM AQQIQDLMFVFENLSDVDDMGIQVLLREVQQDVLMKALKGADEQLKEKLLGNMSKRAAELLRDDLEAMGPIRISEVEVAQ KEILSIARRLSDSGEIMLGGGGGEEFL
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=326, Percent_Identity=42.638036809816, Blast_Score=260, Evalue=7e-71,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38270; Mature: 38138
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDISVEAKTAPGFKPSELNGIEKTAILLLSLSESDAASILKYLEPKQVQKVGMAMAAM CCCCCEEEECCCCCCCCHHCCCHHHHHHHEEECCCHHHHHHHHHHCHHHHHHHHHHHHHH RDFGQEKVIGVHKLFLDDIQKYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAK HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC GLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFAQFPENTRLDLMMRIANLE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH EVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESHLMETMRESDEE HCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQQIQDLMFVFENLSDVDDMGIQVLLREVQQDVLMKALKGADEQLKEKLLGNMSKRAAE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLRDDLEAMGPIRISEVEVAQKEILSIARRLSDSGEIMLGGGGGEEFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC >Mature Secondary Structure TNDISVEAKTAPGFKPSELNGIEKTAILLLSLSESDAASILKYLEPKQVQKVGMAMAAM CCCCEEEECCCCCCCCHHCCCHHHHHHHEEECCCHHHHHHHHHHCHHHHHHHHHHHHHH RDFGQEKVIGVHKLFLDDIQKYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAK HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC GLDSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFAQFPENTRLDLMMRIANLE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH EVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESHLMETMRESDEE HCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQQIQDLMFVFENLSDVDDMGIQVLLREVQQDVLMKALKGADEQLKEKLLGNMSKRAAE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLRDDLEAMGPIRISEVEVAQKEILSIARRLSDSGEIMLGGGGGEEFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]