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The map label for this gene is fliF [H]

Identifier: 167623379

GI number: 167623379

Start: 1745848

End: 1747548

Strand: Direct

Name: fliF [H]

Synonym: Shal_1448

Alternate gene names: 167623379

Gene position: 1745848-1747548 (Clockwise)

Preceding gene: 167623378

Following gene: 167623380

Centisome position: 33.4

GC content: 48.15

Gene sequence:

>1701_bases
ATGGTCGTAGGTACAGGTTCTGGTTTAGCAACCAACCCGCAAACATCAGGTGTTCAAGAAGAACATAAGCCTGGCTTAAT
GGGATCGTTAGGCGGCGTAGATATGTTACGCCAAGTGACGATGATTTTGGCGCTTGCTATCTGTCTAGCCTTAGCTGTTT
TTGTGATGATCTGGGCGCAAGAGCCTGAATATCGTCCGCTAGGGCAGATGAGCACCGCAGAGATGGTGCAGGTATTGGAT
GTACTAGACAACAATCAAGTTAAGTATGAGATCCAGGGTGATGTGGTCAAGGTCCCTGAAGATAAGTTTCAAGATGTGAG
AATGTTATTAAGCCGCGAAGGGCTCGATAATACCGATGCAAACAATGACTTTCTAAATAAAGACAGTGGCTTTGGCGTGA
GCCAGCGCATGGAGCAAGCGCGTCTAAAGCATAGCCAAGAGCAAAACCTTGCCCGCATTATTGAAGAACTAAAAAGTGTC
ACTCGAGCTAAAGTGATTTTAGCCCTACCCAAAGAGAACGTCTTTGCCCGCAACCGCTCTAAGCCAAGTGCGACCGTGGT
TGTGAGCACTCGACGCAGTGGTCTAAGTCAAGAAGAAGTTGACTCGATAGTCGATATCGTTGCCTCTGCTGTGCATAACC
TTGAGCCGAATAAAGTCACGGTAACCGATGCCAATGGCCGCCTGCTTAACTCAGGTACTCAAGATGGCAGCTCCGCTATC
GCGCGCCGCGAGCTTGAAATCGTTCAACAAAAAGAGTCTGAGTATCGTAATAAGGTTGAGTCGATTTTAATGCCAATCTT
AGGCCCAGAGAATTTCACCTCTCAGGTCGATGTCAGCATGGATTTCACCGCGGTTGAGCAAACGGCTAAGCGCTATAATC
CAGATTTACCGTCGTTAAGAAGCGAGATGGTCGTTGAAAATAACTCTAATGGTGGCACCTCTGGCGGTATACCTGGCGCG
CTATCGAATCAGCCTCCTATGGCTTCAGATATCCCACAAGAGGTCAATGCTGAAGAAACGGTAACGCGGAACTCTGGTAG
TACCCATAAAGAAGCGACACGTAATTTCGAACTCGATACCACGATTAGTCATACTCGTCAGCAAATTGGCACGTTACGCC
GTGTGAGTGTTTCTGTGGCAGTTGATTTTAAAAACGCGCCAATGGCAGAAGATGGCAGTGTTAACCGGGTACCTCGCACT
GAGCAAGAGCTTGCAAATATTCGCCGTTTATTGGAAGGGGCCGTAGGCTTTAATACTCAACGCGGCGATGTTATCGAAGT
GGTTACCGTGCCGTTTATGGATCAGCTGATAGAAGCCGCGCCAGCACCAGAGCTGTGGGAGCAGCCATGGTTTTGGCGTG
TACTTAGGTTAGTGCTTGGAGCATTAGTGATTTTGGTCTTGATCCTTGCCGTTGTGCGTCCAATGCTGAAGAAGTTGGTA
TATCCCGATAGCGTCAATATGCCGGATGAGCCACAGCGGGGCGGCGAACTGGCTGAAATTGAAGATCAATATGCCGCAGA
TACCTTGGGTATGCTACAGCGCCCAGAAGCAGAATATAGTTATGCAGATGACGGCTCTATCTTGATCCCGAACCTGCATA
AAGATGATGATATGATCAAAGCGATCCGCGCACTGGTGGCTAATGAGCCTGAACTATCGACGCAAGTTGTGAAAAACTGG
TTACTTGAAGATGACAAATGA

Upstream 100 bases:

>100_bases
GCAAGTGCGCAATAAGCTTGTTGAAGCTTATAAAGAAATTATGAGTATGCCTGTTTAGGCCGTTATTACGTAGAAACAGG
GTGCAATAGTGAGTACAGAA

Downstream 100 bases:

>100_bases
TATTAGTGTAGAAGCGAAAACGGCGCCTGGATTTAAGCCCAGTGAATTAAATGGCATCGAGAAAACGGCCATTTTACTGT
TAAGCTTGAGTGAAAGTGAT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MVVGTGSGLATNPQTSGVQEEHKPGLMGSLGGVDMLRQVTMILALAICLALAVFVMIWAQEPEYRPLGQMSTAEMVQVLD
VLDNNQVKYEIQGDVVKVPEDKFQDVRMLLSREGLDNTDANNDFLNKDSGFGVSQRMEQARLKHSQEQNLARIIEELKSV
TRAKVILALPKENVFARNRSKPSATVVVSTRRSGLSQEEVDSIVDIVASAVHNLEPNKVTVTDANGRLLNSGTQDGSSAI
ARRELEIVQQKESEYRNKVESILMPILGPENFTSQVDVSMDFTAVEQTAKRYNPDLPSLRSEMVVENNSNGGTSGGIPGA
LSNQPPMASDIPQEVNAEETVTRNSGSTHKEATRNFELDTTISHTRQQIGTLRRVSVSVAVDFKNAPMAEDGSVNRVPRT
EQELANIRRLLEGAVGFNTQRGDVIEVVTVPFMDQLIEAAPAPELWEQPWFWRVLRLVLGALVILVLILAVVRPMLKKLV
YPDSVNMPDEPQRGGELAEIEDQYAADTLGMLQRPEAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQVVKNW
LLEDDK

Sequences:

>Translated_566_residues
MVVGTGSGLATNPQTSGVQEEHKPGLMGSLGGVDMLRQVTMILALAICLALAVFVMIWAQEPEYRPLGQMSTAEMVQVLD
VLDNNQVKYEIQGDVVKVPEDKFQDVRMLLSREGLDNTDANNDFLNKDSGFGVSQRMEQARLKHSQEQNLARIIEELKSV
TRAKVILALPKENVFARNRSKPSATVVVSTRRSGLSQEEVDSIVDIVASAVHNLEPNKVTVTDANGRLLNSGTQDGSSAI
ARRELEIVQQKESEYRNKVESILMPILGPENFTSQVDVSMDFTAVEQTAKRYNPDLPSLRSEMVVENNSNGGTSGGIPGA
LSNQPPMASDIPQEVNAEETVTRNSGSTHKEATRNFELDTTISHTRQQIGTLRRVSVSVAVDFKNAPMAEDGSVNRVPRT
EQELANIRRLLEGAVGFNTQRGDVIEVVTVPFMDQLIEAAPAPELWEQPWFWRVLRLVLGALVILVLILAVVRPMLKKLV
YPDSVNMPDEPQRGGELAEIEDQYAADTLGMLQRPEAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQVVKNW
LLEDDK
>Mature_566_residues
MVVGTGSGLATNPQTSGVQEEHKPGLMGSLGGVDMLRQVTMILALAICLALAVFVMIWAQEPEYRPLGQMSTAEMVQVLD
VLDNNQVKYEIQGDVVKVPEDKFQDVRMLLSREGLDNTDANNDFLNKDSGFGVSQRMEQARLKHSQEQNLARIIEELKSV
TRAKVILALPKENVFARNRSKPSATVVVSTRRSGLSQEEVDSIVDIVASAVHNLEPNKVTVTDANGRLLNSGTQDGSSAI
ARRELEIVQQKESEYRNKVESILMPILGPENFTSQVDVSMDFTAVEQTAKRYNPDLPSLRSEMVVENNSNGGTSGGIPGA
LSNQPPMASDIPQEVNAEETVTRNSGSTHKEATRNFELDTTISHTRQQIGTLRRVSVSVAVDFKNAPMAEDGSVNRVPRT
EQELANIRRLLEGAVGFNTQRGDVIEVVTVPFMDQLIEAAPAPELWEQPWFWRVLRLVLGALVILVLILAVVRPMLKKLV
YPDSVNMPDEPQRGGELAEIEDQYAADTLGMLQRPEAEYSYADDGSILIPNLHKDDDMIKAIRALVANEPELSTQVVKNW
LLEDDK

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=445, Percent_Identity=32.5842696629214, Blast_Score=212, Evalue=6e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 62444; Mature: 62444

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGTGSGLATNPQTSGVQEEHKPGLMGSLGGVDMLRQVTMILALAICLALAVFVMIWAQ
CEEECCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPEYRPLGQMSTAEMVQVLDVLDNNQVKYEIQGDVVKVPEDKFQDVRMLLSREGLDNTDA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCC
NNDFLNKDSGFGVSQRMEQARLKHSQEQNLARIIEELKSVTRAKVILALPKENVFARNRS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCC
KPSATVVVSTRRSGLSQEEVDSIVDIVASAVHNLEPNKVTVTDANGRLLNSGTQDGSSAI
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHH
ARRELEIVQQKESEYRNKVESILMPILGPENFTSQVDVSMDFTAVEQTAKRYNPDLPSLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCCHHHH
SEMVVENNSNGGTSGGIPGALSNQPPMASDIPQEVNAEETVTRNSGSTHKEATRNFELDT
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHCCCCCCH
TISHTRQQIGTLRRVSVSVAVDFKNAPMAEDGSVNRVPRTEQELANIRRLLEGAVGFNTQ
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
RGDVIEVVTVPFMDQLIEAAPAPELWEQPWFWRVLRLVLGALVILVLILAVVRPMLKKLV
CCCEEEEEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPDSVNMPDEPQRGGELAEIEDQYAADTLGMLQRPEAEYSYADDGSILIPNLHKDDDMIK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH
AIRALVANEPELSTQVVKNWLLEDDK
HHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVVGTGSGLATNPQTSGVQEEHKPGLMGSLGGVDMLRQVTMILALAICLALAVFVMIWAQ
CEEECCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPEYRPLGQMSTAEMVQVLDVLDNNQVKYEIQGDVVKVPEDKFQDVRMLLSREGLDNTDA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCC
NNDFLNKDSGFGVSQRMEQARLKHSQEQNLARIIEELKSVTRAKVILALPKENVFARNRS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCCC
KPSATVVVSTRRSGLSQEEVDSIVDIVASAVHNLEPNKVTVTDANGRLLNSGTQDGSSAI
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHH
ARRELEIVQQKESEYRNKVESILMPILGPENFTSQVDVSMDFTAVEQTAKRYNPDLPSLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCCCHHHH
SEMVVENNSNGGTSGGIPGALSNQPPMASDIPQEVNAEETVTRNSGSTHKEATRNFELDT
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHCCCCCCH
TISHTRQQIGTLRRVSVSVAVDFKNAPMAEDGSVNRVPRTEQELANIRRLLEGAVGFNTQ
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
RGDVIEVVTVPFMDQLIEAAPAPELWEQPWFWRVLRLVLGALVILVLILAVVRPMLKKLV
CCCEEEEEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPDSVNMPDEPQRGGELAEIEDQYAADTLGMLQRPEAEYSYADDGSILIPNLHKDDDMIK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH
AIRALVANEPELSTQVVKNWLLEDDK
HHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8675317; 10984043 [H]