Click here to switch to the map view.

The map label for this gene is 167623351

Identifier: 167623351

GI number: 167623351

Start: 1718419

End: 1719048

Strand: Direct

Name: 167623351

Synonym: Shal_1420

Alternate gene names: NA

Gene position: 1718419-1719048 (Clockwise)

Preceding gene: 167623348

Following gene: 167623352

Centisome position: 32.88

GC content: 46.35

Gene sequence:

>630_bases
ATGTACAAGCCAATCATTTTTCTATCTTTATTATTCACCCTCGGTTGTGCAAGCACGGAAGGGGATAGTCATACAGATCA
GCAGATGACTAACGGCAATGGTTTGCCGCATACTGCTGCGATAAATCATTTGTCACAACAGATGGTAAACGAGTTAGTAC
GACAGAACGACAGTTTGCGCCCAGATCAGCCGTTGCTGGTTTCTACGCCTGTGTTGTTATCAGATATGACATCGACTAAT
GCTCTTGGCCTGCAATATCAACAAGGCTTGATAGCGGCGCTACATGATCATCAATTTAATCTAATCGATATCAACGTCAG
TGACGCGCTTAAGGTCACGCCTACTGGAGAGTTTATTTTGACTCGTGATTGGCAGCAGCTAGCCGCTGATCTAGCTGTTG
AGCATGTGGTGGTTTCTACCATGAGTTTATCGACTCAAGGTGTGGCGTTAAACAGCCGCATCGTTAATGTTACCAATAAT
CGAGTGGTTTCTGCGGCGCAAAGTTTTGTTAATGCCAGTGCCATGCCTAATTACATTGGGCTGTCAGAAAAGGTCGTCTC
AGAGCATGGGCTACTGTACCGGAACGCCCAAGGCGGACAGCGCTCAGTAACAATCGTGGGGGATAAATAG

Upstream 100 bases:

>100_bases
ATTGCCGATAAGAATGAAATAGCATTAATTTGTACCAATAAGGTACAGGATCATTGCTGTAACTCACAGTAGTGATTAAC
GCCTGATAGGAAATCAAACA

Downstream 100 bases:

>100_bases
ATGAAAGCCATTATTTTATTTGCAGCGTTAAGCCTTTGTGCTTGCTCCGTGCAAGACAGGTATGTGCAGTATGAAACTGA
GGCGCCAACATCTTTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MYKPIIFLSLLFTLGCASTEGDSHTDQQMTNGNGLPHTAAINHLSQQMVNELVRQNDSLRPDQPLLVSTPVLLSDMTSTN
ALGLQYQQGLIAALHDHQFNLIDINVSDALKVTPTGEFILTRDWQQLAADLAVEHVVVSTMSLSTQGVALNSRIVNVTNN
RVVSAAQSFVNASAMPNYIGLSEKVVSEHGLLYRNAQGGQRSVTIVGDK

Sequences:

>Translated_209_residues
MYKPIIFLSLLFTLGCASTEGDSHTDQQMTNGNGLPHTAAINHLSQQMVNELVRQNDSLRPDQPLLVSTPVLLSDMTSTN
ALGLQYQQGLIAALHDHQFNLIDINVSDALKVTPTGEFILTRDWQQLAADLAVEHVVVSTMSLSTQGVALNSRIVNVTNN
RVVSAAQSFVNASAMPNYIGLSEKVVSEHGLLYRNAQGGQRSVTIVGDK
>Mature_209_residues
MYKPIIFLSLLFTLGCASTEGDSHTDQQMTNGNGLPHTAAINHLSQQMVNELVRQNDSLRPDQPLLVSTPVLLSDMTSTN
ALGLQYQQGLIAALHDHQFNLIDINVSDALKVTPTGEFILTRDWQQLAADLAVEHVVVSTMSLSTQGVALNSRIVNVTNN
RVVSAAQSFVNASAMPNYIGLSEKVVSEHGLLYRNAQGGQRSVTIVGDK

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22638; Mature: 22638

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKPIIFLSLLFTLGCASTEGDSHTDQQMTNGNGLPHTAAINHLSQQMVNELVRQNDSLR
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDQPLLVSTPVLLSDMTSTNALGLQYQQGLIAALHDHQFNLIDINVSDALKVTPTGEFIL
CCCCEEEECCHHHHCCCCCCCCCCHHHCCHHEEECCCCEEEEEEECCCCEEECCCCCEEE
TRDWQQLAADLAVEHVVVSTMSLSTQGVALNSRIVNVTNNRVVSAAQSFVNASAMPNYIG
ECCHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCC
LSEKVVSEHGLLYRNAQGGQRSVTIVGDK
CHHHHHHHCCEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MYKPIIFLSLLFTLGCASTEGDSHTDQQMTNGNGLPHTAAINHLSQQMVNELVRQNDSLR
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDQPLLVSTPVLLSDMTSTNALGLQYQQGLIAALHDHQFNLIDINVSDALKVTPTGEFIL
CCCCEEEECCHHHHCCCCCCCCCCHHHCCHHEEECCCCEEEEEEECCCCEEECCCCCEEE
TRDWQQLAADLAVEHVVVSTMSLSTQGVALNSRIVNVTNNRVVSAAQSFVNASAMPNYIG
ECCHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCC
LSEKVVSEHGLLYRNAQGGQRSVTIVGDK
CHHHHHHHCCEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA