Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623330

Identifier: 167623330

GI number: 167623330

Start: 1689813

End: 1691024

Strand: Direct

Name: 167623330

Synonym: Shal_1399

Alternate gene names: NA

Gene position: 1689813-1691024 (Clockwise)

Preceding gene: 167623329

Following gene: 167623331

Centisome position: 32.33

GC content: 44.22

Gene sequence:

>1212_bases
ATGATAAAAACAAGAGTATTAGTGCAAGCCAGTTCACGCTCATGGGCTGGTGGCGTCGATATCTGCATGGGGATGGTAGA
GGGCGAGATTGCCGTTGTTCGAACCATTCGCCGTGTCTTGAGCCACTTTACCGATTTAGATGTTGTCTTGGTTGCTCCGG
AGTTTGATCGTGGTGGAGAGCTCGATGAGATCGTTAAGCTTATCGATGATGAACGTCTCTCTCTGTATTACGGCCACGAT
GCGAGCCCGCTTAATCGAATGATAGATGCTTGTTCAGATTTAGCCGATAGCGATTATGTGATCAGAGTCGATGGCATTCA
TTTTTGCTTCGACCCTCAGGCAAGTTTAGCTATGCTAGATATCGCCATCAGTGAGCAATTGGATTGTATTAAGTTACCCG
ATGATTTTCCTGTGCATTTTACCTCAGAAATCTTTCGTATCGGCGCACTAAAAGCTATTAATAATGAACTCACTCAGCCT
GAGGATGCCAAGTTTCTCGTGCACCCTAAGTGCTACTTTTCGATGAATGCTCAGCGATATAGAGTTAAGTTCTTAACAGA
GTTACCAAGCTATGCTGATGAATACTTGACTGAGTGTCGCCACTTAGCTACACAAATTTATGCGATCCCGCGTCAAGAGG
TGAATGAGCACCGTATTGTCTCTGGTGACAGATTAGGCTTTCATTACGAGCTCGCCTTACAGCATCTTAAGTCTGATATG
AAGATTATCGACATCGCCTGTGCCGATGGTTACGGTGTCAACATTATGGCGAGTCATTTAAAAGAGGTTCATGGAGCCGA
TTTAGATGAGCTGAGTGTGGAATTTGCGAAGAAAAATAACAGCGCTGCCAATACCGATTACTTTGTCGAAGACATCACAA
AGTTGTCTTTTGCCGATGAGTCCTACGACGCTGTAACCAGCTTTGAAACCCTTGAGCATGTACCAGAGCATGAGTGCTTA
AGTGAAATCAAACGCGTGCTGAAACCTGGCGGTGTCTTAGTGTTAAGTACCCCTCAAAATAGCATAGGCCATATCCCTGT
TAACTCTTGTCACCTTATTGAATATTCTCTCGATGAGCTGCTGGCACTCGTTAACCAGTATTTTATTGTCGTCAAAGTGA
TCGGTATCAAAGCGGGCATTATTTATGACGAAACAGACCCTTATGGCACCAATACTGTGCTTATCTGCGTAAAGCCTAAT
AGTAAGGATTGA

Upstream 100 bases:

>100_bases
TATCAATCCATGGCTGAAATCGGTGTCGGCAGAGAGATCTGCATCTACGCCCGTAAGCGCAGTAGTTAATGCAAAATGAA
GCCGCTTAATAGGAATTAAC

Downstream 100 bases:

>100_bases
TAATGAAAACCCATCAATTAATTGTGCCGACTCTCAATGAACTGAAACAGCAGTCGGCGGCGCAATTAACCCAATTAGCC
GAAGATATTAGGCAGTTTCT

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Methyltransferase And Glycosyltransferase; Glycosyl Transferase Family Protein; Methyltransferase Domain Protein; Glycosyl Transferase

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD
ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP
EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM
KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL
SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN
SKD

Sequences:

>Translated_403_residues
MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD
ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP
EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM
KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL
SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN
SKD
>Mature_403_residues
MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGELDEIVKLIDDERLSLYYGHD
ASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLDIAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQP
EDAKFLVHPKCYFSMNAQRYRVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM
KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADESYDAVTSFETLEHVPEHECL
SEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDELLALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPN
SKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45194; Mature: 45194

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGE
CCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
LDEIVKLIDDERLSLYYGHDASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLD
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEE
IAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQPEDAKFLVHPKCYFSMNAQRY
EHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCE
RVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM
EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCC
KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADE
EEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
SYDAVTSFETLEHVPEHECLSEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDEL
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHH
LALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPNSKD
HHHHHHHHEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MIKTRVLVQASSRSWAGGVDICMGMVEGEIAVVRTIRRVLSHFTDLDVVLVAPEFDRGGE
CCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
LDEIVKLIDDERLSLYYGHDASPLNRMIDACSDLADSDYVIRVDGIHFCFDPQASLAMLD
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEE
IAISEQLDCIKLPDDFPVHFTSEIFRIGALKAINNELTQPEDAKFLVHPKCYFSMNAQRY
EHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCE
RVKFLTELPSYADEYLTECRHLATQIYAIPRQEVNEHRIVSGDRLGFHYELALQHLKSDM
EEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCHHHHHHHHHHCCC
KIIDIACADGYGVNIMASHLKEVHGADLDELSVEFAKKNNSAANTDYFVEDITKLSFADE
EEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
SYDAVTSFETLEHVPEHECLSEIKRVLKPGGVLVLSTPQNSIGHIPVNSCHLIEYSLDEL
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHH
LALVNQYFIVVKVIGIKAGIIYDETDPYGTNTVLICVKPNSKD
HHHHHHHHEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA