Click here to switch to the map view.

The map label for this gene is mcp1 [H]

Identifier: 167623317

GI number: 167623317

Start: 1670528

End: 1672531

Strand: Reverse

Name: mcp1 [H]

Synonym: Shal_1385

Alternate gene names: 167623317

Gene position: 1672531-1670528 (Counterclockwise)

Preceding gene: 167623318

Following gene: 167623316

Centisome position: 32.0

GC content: 47.75

Gene sequence:

>2004_bases
ATGAATTATAAAAATTGGCCTATAGCCAAACAAATAGGCTTGCTCGCTTTAGTCCTCACCGTGCTCGTTTTTGGTGTTCT
TGGTTGCGTATCCTATTTAACCGCCTCCGATGTACTAAGAAATAAAGGGATCAGCGCGATGCAAGCGCAAACCGAAGGCA
CAGCAGATTTAATTGAGCTGCAATATGAAAGTCTGCAGTCACTTGCAGAACGCAATGCCGACGTGTTTCGCGCCATGTAC
CCAGGTAACTTCTATAAACCGGATAAAACGGTCAGAGTAATGGGGACAGAGACCCCAGCCTTGAGGCATGAAAAAGAGCA
GATCAACGCCTCAAAGAGCAAGGTTGATCGCTACTCTAATCTGACCGGTGGCAATGCAACCGTGTTTGTCCGAGACGGTG
ATAACTTTATCCGTATCTCCACCTCGCTAAAAAAAGCCGATGGCAAACGTGCTCTGGGCACCAACTTAGATAAAGATCAC
CCAGCTTACCGCGCACTTATCAAAGGTAATAGCTACGAAGGCTATGCCCAGCTGTTTGGTAAAGACTACATGACTATCTA
CCGCCCCATTAAAAATAGTGGCGGCGAAACTATCGGGATCATGTATATCGGTTTCGATATTAGCGGCTCTTTGGCTCAAT
TACGCGAATCGATTAATAAGCTGCAACTTGAGGAGTCTGGCAGCTACCTATTGGTGCGTAAATCAGATTTGACGATTATT
GCTCATCCACGGCACCAAGCTGGCGGTAAAGTCTCAACCGAGATACTTGGTGGGATAAGCATAGAGCAGGCCCTTACTCA
TCGTGGCTCTTGGGAGTACACCAACAATTTAGGCGCTAAGGCTTACGCTTATAGCATCAATATTCCTGGTTGGGATTGGG
TCATCATTGGCCAAGTTGATGCTGCAGAGCTTAACGAAGAAAGCGTTACCCTATTAAACATCAATATGGCCGTGTCTTTA
ATTGGCATGATAGTGATTACCCTACTGTTATCTCTGGTCTTGTTTAGAACGCTTAAACCGCTAGGCTGCTTGCAAAATCA
ATTAGAGAAATTGGGCTCAGGCGATCTTTCACAAAAATTTGCTTCAATAGATGCAAGCAGTAAAAATGAAGTGGATCTCA
TCACCAATAGCACCTCTAAGATGGCGACTAACTTAAGAGAGCTTATCTTGGCTCTACAACAATCAGTTAGCGCATTGCAG
GCTCACTCTAGCCACACTCAAGAGACTGCCCGTCTAAACGGTGAAGAGGCGCAATCTTTGATGGCACAAACGGATCAGAT
AGCAACGGCCATCGAGGAGATGTCAGCCTCAGTGCGCGATGTTGCTAACCATGCTAGCGAAGGCGCGACAATGAGCCAGC
GTGTGGATGATGCTGCAAAAGGTGGACAGGCTAACTTAAACGATCTGGTCAACGGCTTACAAAGTCTCAGCAGCCAGCTT
TCCGATAGTCATAATAGTGTCGAGATCGTCAATAAAGAGAGCCAAGCGATTAGCAAAGTCACCGAGGTCATCAACGCCAT
TGCCGAGCAGACCAACCTCCTCGCCCTTAACGCAGCGATTGAAGCGGCAAGAGCTGGCGAGCAAGGTCGAGGCTTTGCTG
TGGTTGCCGACGAAGTACGCACGCTAGCACAGCGTACTCAAACATCGATTGCAGAGATCTCGCAAACCATTACTCAGCTG
CAGTCTCAAGTAAAGCAGACCGCCGTGCAGATGGATCAAAGTAATGCTTTAGGGGATGCGTCTGCAGCCCAAGGTAATGA
AGCGATTGCACAGTTAATTGAGATTAACACTAGCATTGCAGAACTCGCTACAACATCAACAAGCATCGCTAGCGCTACTG
AGCAGCAAAGTGCAGTTGCAGAAGAGATCACCCGCAACCTACACCAAATCACCGAGCTTGCCAGAGATGGTGAGCAACGC
GCGGGCGAGAGCGTCGACTCGGCGGAAAGCTTAGCCGCAATCGCCAATGAGATTAACACTAAGATCAGCGTGTTTAAGGC
GTAA

Upstream 100 bases:

>100_bases
TTTTATTCAACGAATTAAAAGGATAACTTTTAGACCTCCATCAACTCTTTTTTCGTAAAAATCAATTACATTGACGCACC
ACAAGCAAACTTGAATTGAT

Downstream 100 bases:

>100_bases
TGTCTCAGCTTAAATCGCCCTATTTTATTGATTAAGTCATAAAGGCAACAGCTATCACACTGTTGCCTTTTTTATTCAAG
CAACCGTCAGCAACTTCCAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MNYKNWPIAKQIGLLALVLTVLVFGVLGCVSYLTASDVLRNKGISAMQAQTEGTADLIELQYESLQSLAERNADVFRAMY
PGNFYKPDKTVRVMGTETPALRHEKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKADGKRALGTNLDKDH
PAYRALIKGNSYEGYAQLFGKDYMTIYRPIKNSGGETIGIMYIGFDISGSLAQLRESINKLQLEESGSYLLVRKSDLTII
AHPRHQAGGKVSTEILGGISIEQALTHRGSWEYTNNLGAKAYAYSINIPGWDWVIIGQVDAAELNEESVTLLNINMAVSL
IGMIVITLLLSLVLFRTLKPLGCLQNQLEKLGSGDLSQKFASIDASSKNEVDLITNSTSKMATNLRELILALQQSVSALQ
AHSSHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQANLNDLVNGLQSLSSQL
SDSHNSVEIVNKESQAISKVTEVINAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKQTAVQMDQSNALGDASAAQGNEAIAQLIEINTSIAELATTSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLAAIANEINTKISVFKA

Sequences:

>Translated_667_residues
MNYKNWPIAKQIGLLALVLTVLVFGVLGCVSYLTASDVLRNKGISAMQAQTEGTADLIELQYESLQSLAERNADVFRAMY
PGNFYKPDKTVRVMGTETPALRHEKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKADGKRALGTNLDKDH
PAYRALIKGNSYEGYAQLFGKDYMTIYRPIKNSGGETIGIMYIGFDISGSLAQLRESINKLQLEESGSYLLVRKSDLTII
AHPRHQAGGKVSTEILGGISIEQALTHRGSWEYTNNLGAKAYAYSINIPGWDWVIIGQVDAAELNEESVTLLNINMAVSL
IGMIVITLLLSLVLFRTLKPLGCLQNQLEKLGSGDLSQKFASIDASSKNEVDLITNSTSKMATNLRELILALQQSVSALQ
AHSSHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQANLNDLVNGLQSLSSQL
SDSHNSVEIVNKESQAISKVTEVINAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKQTAVQMDQSNALGDASAAQGNEAIAQLIEINTSIAELATTSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLAAIANEINTKISVFKA
>Mature_667_residues
MNYKNWPIAKQIGLLALVLTVLVFGVLGCVSYLTASDVLRNKGISAMQAQTEGTADLIELQYESLQSLAERNADVFRAMY
PGNFYKPDKTVRVMGTETPALRHEKEQINASKSKVDRYSNLTGGNATVFVRDGDNFIRISTSLKKADGKRALGTNLDKDH
PAYRALIKGNSYEGYAQLFGKDYMTIYRPIKNSGGETIGIMYIGFDISGSLAQLRESINKLQLEESGSYLLVRKSDLTII
AHPRHQAGGKVSTEILGGISIEQALTHRGSWEYTNNLGAKAYAYSINIPGWDWVIIGQVDAAELNEESVTLLNINMAVSL
IGMIVITLLLSLVLFRTLKPLGCLQNQLEKLGSGDLSQKFASIDASSKNEVDLITNSTSKMATNLRELILALQQSVSALQ
AHSSHTQETARLNGEEAQSLMAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQANLNDLVNGLQSLSSQL
SDSHNSVEIVNKESQAISKVTEVINAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSIAEISQTITQL
QSQVKQTAVQMDQSNALGDASAAQGNEAIAQLIEINTSIAELATTSTSIASATEQQSAVAEEITRNLHQITELARDGEQR
AGESVDSAESLAAIANEINTKISVFKA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=424, Percent_Identity=26.4150943396226, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1787690, Length=363, Percent_Identity=27.5482093663912, Blast_Score=114, Evalue=3e-26,
Organism=Escherichia coli, GI1788195, Length=299, Percent_Identity=28.4280936454849, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI2367378, Length=303, Percent_Identity=26.4026402640264, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=31.5573770491803, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 71857; Mature: 71857

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKNWPIAKQIGLLALVLTVLVFGVLGCVSYLTASDVLRNKGISAMQAQTEGTADLIEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
QYESLQSLAERNADVFRAMYPGNFYKPDKTVRVMGTETPALRHEKEQINASKSKVDRYSN
HHHHHHHHHHCCHHHEEHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
LTGGNATVFVRDGDNFIRISTSLKKADGKRALGTNLDKDHPAYRALIKGNSYEGYAQLFG
CCCCCEEEEEECCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHC
KDYMTIYRPIKNSGGETIGIMYIGFDISGSLAQLRESINKLQLEESGSYLLVRKSDLTII
CHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE
AHPRHQAGGKVSTEILGGISIEQALTHRGSWEYTNNLGAKAYAYSINIPGWDWVIIGQVD
ECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCC
AAELNEESVTLLNINMAVSLIGMIVITLLLSLVLFRTLKPLGCLQNQLEKLGSGDLSQKF
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
ASIDASSKNEVDLITNSTSKMATNLRELILALQQSVSALQAHSSHTQETARLNGEEAQSL
HHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQANLNDLVNGLQSLSSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SDSHNSVEIVNKESQAISKVTEVINAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
TLAQRTQTSIAEISQTITQLQSQVKQTAVQMDQSNALGDASAAQGNEAIAQLIEINTSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHH
ELATTSTSIASATEQQSAVAEEITRNLHQITELARDGEQRAGESVDSAESLAAIANEINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCC
KISVFKA
CEEEEEC
>Mature Secondary Structure
MNYKNWPIAKQIGLLALVLTVLVFGVLGCVSYLTASDVLRNKGISAMQAQTEGTADLIEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHH
QYESLQSLAERNADVFRAMYPGNFYKPDKTVRVMGTETPALRHEKEQINASKSKVDRYSN
HHHHHHHHHHCCHHHEEHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
LTGGNATVFVRDGDNFIRISTSLKKADGKRALGTNLDKDHPAYRALIKGNSYEGYAQLFG
CCCCCEEEEEECCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHC
KDYMTIYRPIKNSGGETIGIMYIGFDISGSLAQLRESINKLQLEESGSYLLVRKSDLTII
CHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE
AHPRHQAGGKVSTEILGGISIEQALTHRGSWEYTNNLGAKAYAYSINIPGWDWVIIGQVD
ECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCC
AAELNEESVTLLNINMAVSLIGMIVITLLLSLVLFRTLKPLGCLQNQLEKLGSGDLSQKF
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
ASIDASSKNEVDLITNSTSKMATNLRELILALQQSVSALQAHSSHTQETARLNGEEAQSL
HHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MAQTDQIATAIEEMSASVRDVANHASEGATMSQRVDDAAKGGQANLNDLVNGLQSLSSQL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SDSHNSVEIVNKESQAISKVTEVINAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHH
TLAQRTQTSIAEISQTITQLQSQVKQTAVQMDQSNALGDASAAQGNEAIAQLIEINTSIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHH
ELATTSTSIASATEQQSAVAEEITRNLHQITELARDGEQRAGESVDSAESLAAIANEINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCC
KISVFKA
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]