Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is yeeI [C]

Identifier: 167623287

GI number: 167623287

Start: 1630815

End: 1631639

Strand: Reverse

Name: yeeI [C]

Synonym: Shal_1355

Alternate gene names: 167623287

Gene position: 1631639-1630815 (Counterclockwise)

Preceding gene: 167623288

Following gene: 167623286

Centisome position: 31.22

GC content: 43.39

Gene sequence:

>825_bases
ATGTTAGCTATTTTTCTTATCCTGCTTATCAGCGGTAGTGTGATTGCATGGATTGCAAGTGCGTCATGGCGCGCTCGTCG
TCGACGAAAACATATTAGCCAACAGCCTTTTCCCCATGAATGGCGTAATATTTTAAAACGGCGTATTCCGTTCTTTAGAG
TATTACCTGCGGATCTGCAGCTACAGCTGAAAAAACACATTCAAATCTTTATCGCAGAAAAGCATTTTGTCGGATGCGAT
GGCCTGCAAATCGATGATGATATTCGCGTCACTGTAGCCGCACAAGCCTGCTTATTATTACTCAATAGGCAAACCGACTT
TTATCCAAGATTAAAAGAGATCCTGATTTATCCGTCCGCATTTATTGTCGAAAACCAGCAGCAACATGGTGCAGGAGTCG
TGTCTGATCAACGAAGAGTGTTATCGGGTGAGTCATGGCAACATGGTCGAGTGATATTGTCTTGGCAAACAACCCAGCAC
GATGCCGCAGTACCAGATGATGGCAGTAATGTGGTGATCCATGAGTTTGCCCATCAATTAGATCAAGAAGATGGTAGTGC
GAACGGTGCCCCAATTCTAAAAAATATCTCAGATTACGCATCTTGGTCTGAAGTACTAATGCAAGAGTATCAAAGCCTAG
TCAATGCCACTCAATACGGTGAGTACTCACTATTTAGCTACTATGGCGCCACGAACCCTGCGGAGTTTTTTGCCGTAATA
AGTGAAGTATTTTTTGAGAAACCTCATGAGTTTATCAATCAACATCCGGCGCTTTATCAAGAGTTGAGATCCTTCTACCA
ACTCGATCCAGTGAATTGGCAGTAA

Upstream 100 bases:

>100_bases
AATTTAATACATACTAATCCAACAAGCCCGTGGTTGAATCTTGTCCACCGTGTCCATATATCATGATTAACGCAAATAAA
TCTTAATAGAAAGGAAAGCT

Downstream 100 bases:

>100_bases
CTCATAAACCTCTATAGAGTTAGTGTCAGTAAAACGGCTAGATGATTACAAGGATAGATATGTTCAAACTAAGTGCCTCG
AAAGCAATATGTATTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD
GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH
DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI
SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ

Sequences:

>Translated_274_residues
MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD
GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH
DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI
SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ
>Mature_274_residues
MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQLQLKKHIQIFIAEKHFVGCD
GLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSAFIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQH
DAAVPDDGSNVVIHEFAHQLDQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI
SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ

Specific function: Unknown

COG id: COG3228

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mtfA family [H]

Homologues:

Organism=Escherichia coli, GI87082014, Length=237, Percent_Identity=33.7552742616034, Blast_Score=124, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010384 [H]

Pfam domain/function: PF06167 DUF980 [H]

EC number: NA

Molecular weight: Translated: 31623; Mature: 31623

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCHHHH
LQLKKHIQIFIAEKHFVGCDGLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSA
HHHHHCEEEEEECCCEECCCCCEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
FIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQHDAAVPDDGSNVVIHEFAHQL
HEECCCHHCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
DQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHH
SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ
HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLAIFLILLISGSVIAWIASASWRARRRRKHISQQPFPHEWRNILKRRIPFFRVLPADLQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCHHHH
LQLKKHIQIFIAEKHFVGCDGLQIDDDIRVTVAAQACLLLLNRQTDFYPRLKEILIYPSA
HHHHHCEEEEEECCCEECCCCCEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
FIVENQQQHGAGVVSDQRRVLSGESWQHGRVILSWQTTQHDAAVPDDGSNVVIHEFAHQL
HEECCCHHCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
DQEDGSANGAPILKNISDYASWSEVLMQEYQSLVNATQYGEYSLFSYYGATNPAEFFAVI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHH
SEVFFEKPHEFINQHPALYQELRSFYQLDPVNWQ
HHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]