Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623276

Identifier: 167623276

GI number: 167623276

Start: 1618761

End: 1619126

Strand: Direct

Name: 167623276

Synonym: Shal_1344

Alternate gene names: NA

Gene position: 1618761-1619126 (Clockwise)

Preceding gene: 167623275

Following gene: 167623278

Centisome position: 30.97

GC content: 36.61

Gene sequence:

>366_bases
ATGGAAGAACATTACGTTAAAAAGGAAATATCGCCGCTGGAGTTTGTAACGAACGGGAAGGCAGAGTTGGCTGAAGTCTT
CACTAAAGGTAGAGTAGAAAATCTAGAAGTTACTATTCTTAAAGACTTTACTGATGCAGTAAAGGCATCGCAAAAATTAA
ATGAAATGGAAAAAAAACAGATAAGAGATTTTATTGAAGACAATATGGATATTGTCAAAGAAGGTTTGGAAAGTTGGATT
GAAGGTGTTGAGGGCATAAGCTCTGCAGAGCGTTGTATTCAAAAGATGTTCTCGGGCCTATCTGAACTTGCTACGTTCAG
TGAAAACTTGGTTGAAATACTTAGAAACCTTAATATACCAGGCTAA

Upstream 100 bases:

>100_bases
CAGCAAACAAAATGGCAAACTCGACCAATCACTAAGTAGCCAGAAACAAAGTGATAATGTAGTCTGCTTATTCCGAACAT
TTATATGAATAGTAGGTTGC

Downstream 100 bases:

>100_bases
GTCTAGACTTCACCACACATCAGCCTCATTTTAAGTGAGGCTTTTTGATACCTGCAGTAAAGCAAATCCTACCTATGCTC
GATATGAATTAATCAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI
EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG

Sequences:

>Translated_121_residues
MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI
EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG
>Mature_121_residues
MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI
EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13753; Mature: 13753

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQ
CCCHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDFIEDNMDIVKEGLESWIEGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIP
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure
MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQ
CCCHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDFIEDNMDIVKEGLESWIEGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIP
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA