| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623276
Identifier: 167623276
GI number: 167623276
Start: 1618761
End: 1619126
Strand: Direct
Name: 167623276
Synonym: Shal_1344
Alternate gene names: NA
Gene position: 1618761-1619126 (Clockwise)
Preceding gene: 167623275
Following gene: 167623278
Centisome position: 30.97
GC content: 36.61
Gene sequence:
>366_bases ATGGAAGAACATTACGTTAAAAAGGAAATATCGCCGCTGGAGTTTGTAACGAACGGGAAGGCAGAGTTGGCTGAAGTCTT CACTAAAGGTAGAGTAGAAAATCTAGAAGTTACTATTCTTAAAGACTTTACTGATGCAGTAAAGGCATCGCAAAAATTAA ATGAAATGGAAAAAAAACAGATAAGAGATTTTATTGAAGACAATATGGATATTGTCAAAGAAGGTTTGGAAAGTTGGATT GAAGGTGTTGAGGGCATAAGCTCTGCAGAGCGTTGTATTCAAAAGATGTTCTCGGGCCTATCTGAACTTGCTACGTTCAG TGAAAACTTGGTTGAAATACTTAGAAACCTTAATATACCAGGCTAA
Upstream 100 bases:
>100_bases CAGCAAACAAAATGGCAAACTCGACCAATCACTAAGTAGCCAGAAACAAAGTGATAATGTAGTCTGCTTATTCCGAACAT TTATATGAATAGTAGGTTGC
Downstream 100 bases:
>100_bases GTCTAGACTTCACCACACATCAGCCTCATTTTAAGTGAGGCTTTTTGATACCTGCAGTAAAGCAAATCCTACCTATGCTC GATATGAATTAATCAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG
Sequences:
>Translated_121_residues MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG >Mature_121_residues MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQIRDFIEDNMDIVKEGLESWI EGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13753; Mature: 13753
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQ CCCHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRDFIEDNMDIVKEGLESWIEGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIP HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC G C >Mature Secondary Structure MEEHYVKKEISPLEFVTNGKAELAEVFTKGRVENLEVTILKDFTDAVKASQKLNEMEKKQ CCCHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRDFIEDNMDIVKEGLESWIEGVEGISSAERCIQKMFSGLSELATFSENLVEILRNLNIP HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA