Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623275

Identifier: 167623275

GI number: 167623275

Start: 1618416

End: 1618613

Strand: Direct

Name: 167623275

Synonym: Shal_1343

Alternate gene names: NA

Gene position: 1618416-1618613 (Clockwise)

Preceding gene: 167623274

Following gene: 167623276

Centisome position: 30.96

GC content: 53.03

Gene sequence:

>198_bases
ATGGCATTAAGTCAATCATCACTAAAGGGCAAGATAGTCAGCGAACTAGAGGCCAGAGGCTTTACCACTAATGGCGAACA
CGCCTTTGCTGCCAAGATGGCCGAAGCCATAGCCGCCGCAGTCGTAGCCGAGATCACCAGCAACGCCCAAGTGCAAGTCA
CAGGCGGCAGTTCATCAGGCACATACAAAGTCAGCTGA

Upstream 100 bases:

>100_bases
TCACTTGTGCCCACATCTGCCATTTTACAGGCGCACCACATGGCGATGGTTCATCAACCGTCACTGCAGGTAAGTAGCAA
GGCAAACATAAGGAAGTCAC

Downstream 100 bases:

>100_bases
TAGCCGTTATTATCAGAGCAATCCGTTATCAATGAAGCATCACAGGCCAGCAAACAAAATGGCAAACTCGACCAATCACT
AAGTAGCCAGAAACAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MALSQSSLKGKIVSELEARGFTTNGEHAFAAKMAEAIAAAVVAEITSNAQVQVTGGSSSGTYKVS

Sequences:

>Translated_65_residues
MALSQSSLKGKIVSELEARGFTTNGEHAFAAKMAEAIAAAVVAEITSNAQVQVTGGSSSGTYKVS
>Mature_64_residues
ALSQSSLKGKIVSELEARGFTTNGEHAFAAKMAEAIAAAVVAEITSNAQVQVTGGSSSGTYKVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6560; Mature: 6429

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSQSSLKGKIVSELEARGFTTNGEHAFAAKMAEAIAAAVVAEITSNAQVQVTGGSSSG
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
TYKVS
EEEEC
>Mature Secondary Structure 
ALSQSSLKGKIVSELEARGFTTNGEHAFAAKMAEAIAAAVVAEITSNAQVQVTGGSSSG
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
TYKVS
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA