| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623235
Identifier: 167623235
GI number: 167623235
Start: 1586452
End: 1586625
Strand: Reverse
Name: 167623235
Synonym: Shal_1302
Alternate gene names: NA
Gene position: 1586625-1586452 (Counterclockwise)
Preceding gene: 167623236
Following gene: 167623232
Centisome position: 30.35
GC content: 48.28
Gene sequence:
>174_bases ATGATGAACGGCGGCAATATTCTTCTTTTCGATAAAGTGAAGAAACAGATACTCGGCCACTCCGATATCAAAGACACCAT GCGTTACGCCCACTTCGCCCCCGATCACCTGGACGACGCCATCACCAAAAACCCAATAGCAACGCTATTGGGTAAAAGTG AGATGACGGAGTAG
Upstream 100 bases:
>100_bases TAAATACAGTTCCTCATTCGAATGTGCGTAGGCGTACCTCGCCAGAACACGTAAATACAGATTTTTACAGAAGAAATAAA GCTTTGGTGCCGACCACTTT
Downstream 100 bases:
>100_bases GGTGAGTACGCCTTGGTCGCTGAAAAAATAATGGTTGGCTATTTTTACTAGCGATAGCCAACAGTTATTTTCCGTATAAG CAATTCGTTATGTCTTTTCT
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase; Integrase Family Protein; Integrase; Bacteriophage Integrase
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE
Sequences:
>Translated_57_residues MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE >Mature_57_residues MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6386; Mature: 6386
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE CCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure MMNGGNILLFDKVKKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIATLLGKSEMTE CCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA