| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is purE [H]
Identifier: 167623179
GI number: 167623179
Start: 1518032
End: 1518535
Strand: Direct
Name: purE [H]
Synonym: Shal_1245
Alternate gene names: 167623179
Gene position: 1518032-1518535 (Clockwise)
Preceding gene: 167623177
Following gene: 167623180
Centisome position: 29.04
GC content: 49.21
Gene sequence:
>504_bases ATGAGCAAACCATTTGTTGCAGTATTAATGGGATCTGATTCAGATCTGCCCACAATGCAAGCCACCCTCGATGTGCTTAG AACTTTCGAAATCAACTTTGAAGCAAAGGTCACTTCAGCGCACCGTACGCCAGCCGCGACCCATGCTTATGTAACCGATG CTGAAGCGCGGGGTTGTAAAGTCTTTATTTGTGCTGCAGGTCTTGCTGCGCACCTAGCTGGCGCTGTTGCTGGTATTACT ACTCGCCCTGTTATTGGTGTGCCAATTGATTGTGGTCCACTAAAAGGCCACGATGCGCTTTTATCAACAGTAATGATGCC TGGCGGCGTCCCTGTAGCGACCGTTGCTATCGGTAGTGCTGGTGCTAAGAACGCTGGCTATCTAGCGGCACAAATGTTAG CTGTTGGTGATGAAGCACTGGCTGTAGCCGTTAAAGAAGAACGTGCTAAGTCTGCTGAAGCCGTTCAAGCTAAAGATGCA GCGCTACAAGCTAAACTAGCTTAA
Upstream 100 bases:
>100_bases TTACGCCGCAGGCTTGGGGGAAGTCTGTTTACTAAGCGTGCTAATTTTCATTATAATGCGCGCAATTATAATAATGTACC GCCCTACTCAAGGACTTAAA
Downstream 100 bases:
>100_bases TTAAACAGGCATTTGCCTGTCGACATCAAATGCCGCCTAGAAAATTTTTTAGGTGGCATTTTTGTTTGATCTGTTTGCAT TTTACCTCCTTATCTCAACT
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSKPFVAVLMGSDSDLPTMQATLDVLRTFEINFEAKVTSAHRTPAATHAYVTDAEARGCKVFICAAGLAAHLAGAVAGIT TRPVIGVPIDCGPLKGHDALLSTVMMPGGVPVATVAIGSAGAKNAGYLAAQMLAVGDEALAVAVKEERAKSAEAVQAKDA ALQAKLA
Sequences:
>Translated_167_residues MSKPFVAVLMGSDSDLPTMQATLDVLRTFEINFEAKVTSAHRTPAATHAYVTDAEARGCKVFICAAGLAAHLAGAVAGIT TRPVIGVPIDCGPLKGHDALLSTVMMPGGVPVATVAIGSAGAKNAGYLAAQMLAVGDEALAVAVKEERAKSAEAVQAKDA ALQAKLA >Mature_166_residues SKPFVAVLMGSDSDLPTMQATLDVLRTFEINFEAKVTSAHRTPAATHAYVTDAEARGCKVFICAAGLAAHLAGAVAGITT RPVIGVPIDCGPLKGHDALLSTVMMPGGVPVATVAIGSAGAKNAGYLAAQMLAVGDEALAVAVKEERAKSAEAVQAKDAA LQAKLA
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=155, Percent_Identity=43.8709677419355, Blast_Score=94, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324702, Length=163, Percent_Identity=46.6257668711656, Blast_Score=131, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16883; Mature: 16752
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPFVAVLMGSDSDLPTMQATLDVLRTFEINFEAKVTSAHRTPAATHAYVTDAEARGCK CCCCEEEEEECCCCCCCHHHHHHHHHHHEECCEEEEEECCCCCCCCCEEEEECCCCCCCE VFICAAGLAAHLAGAVAGITTRPVIGVPIDCGPLKGHDALLSTVMMPGGVPVATVAIGSA EEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC GAKNAGYLAAQMLAVGDEALAVAVKEERAKSAEAVQAKDAALQAKLA CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SKPFVAVLMGSDSDLPTMQATLDVLRTFEINFEAKVTSAHRTPAATHAYVTDAEARGCK CCCEEEEEECCCCCCCHHHHHHHHHHHEECCEEEEEECCCCCCCCCEEEEECCCCCCCE VFICAAGLAAHLAGAVAGITTRPVIGVPIDCGPLKGHDALLSTVMMPGGVPVATVAIGSA EEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC GAKNAGYLAAQMLAVGDEALAVAVKEERAKSAEAVQAKDAALQAKLA CCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]