| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mazG [H]
Identifier: 167623154
GI number: 167623154
Start: 1484116
End: 1484919
Strand: Direct
Name: mazG [H]
Synonym: Shal_1220
Alternate gene names: 167623154
Gene position: 1484116-1484919 (Clockwise)
Preceding gene: 167623153
Following gene: 167623155
Centisome position: 28.39
GC content: 45.65
Gene sequence:
>804_bases ATGACAAGCTTAGTCGGCGATACGACCCCGCTACTTAATATTATGCAAAAACTGCGTGACCCAGAAACAGGTTGTCCCTG GGACAGGGCGCAAAGTTTTCAAACCATCGTACCTTTTACCATAGAGGAAGCCTACGAGGTCGCCGATACCATTGAGCGTA TGGCGCTTGATGAGTTGCCTGACGAGTTAGGGGATCTGCTATTTCAGGTGGTATTTTACTGTCAACTGGGCAAAGAGCAG GGGCTTTTTGATTTCAATACCGTGGTTGAACGTATATGCGATAAATTAACTCGCCGTCATCCCCATGTATTTGAAGGATT AGCGACAACGAGTACAGATGAGATCAAGCAAAATTGGGAACAGTTAAAAGCTATCGAGCGTAGTGAAAGAGCACTCGACT CTGTACTAGACGATATTCCGCTGAGTTTACCCGCGCTGTCGCGTTCGATAAAAATTCAAAAACGTGTCGCTCGAGTGGGT TTTGACTGGGCTGAACTGCCGCCCGTGGTGGCAAAAATCCATGAAGAGATTGATGAAGTCATTTTTGAAGTCGAGCAAGA AACGGTAGATGTGCAAAAAGTGCAAGACGAAATGGGCGACTTATTGTTTGCCGTTGTGAACCTTGCAAGACACTTAGGTG TTGAGCCTGAAAAGGCATTAAGGCAAGCAAATCATAAGTTTGAAAGAAGGTTTAGGGGTGTTGAAGCCTATGCTCAAGCG GATGGCCGTGCCATGAATGAGCATACATTAGAGGAGCTCGATGGCTACTGGGATAGCGTTAAACAGGATGAGAGAAATAA ATAA
Upstream 100 bases:
>100_bases ATGGTTGCCGTTTTTATATGGTTTACTTTTAAAGTAAACGTTGGCAAACATGTATTCAGCCCTGTGCGAAATAAACGATA TCGGAAAGTAGGAAAATAAA
Downstream 100 bases:
>100_bases CTTAGATTTAAAGCTAATTGTAGTTTGTCGAATCGCAGTTGCTTTGGTATAATATTGCCCCGTCCTAGTGCTTTCTTACA AGCACGTATTTCCAACTCAT
Product: nucleoside triphosphate pyrophosphohydrolase
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTSLVGDTTPLLNIMQKLRDPETGCPWDRAQSFQTIVPFTIEEAYEVADTIERMALDELPDELGDLLFQVVFYCQLGKEQ GLFDFNTVVERICDKLTRRHPHVFEGLATTSTDEIKQNWEQLKAIERSERALDSVLDDIPLSLPALSRSIKIQKRVARVG FDWAELPPVVAKIHEEIDEVIFEVEQETVDVQKVQDEMGDLLFAVVNLARHLGVEPEKALRQANHKFERRFRGVEAYAQA DGRAMNEHTLEELDGYWDSVKQDERNK
Sequences:
>Translated_267_residues MTSLVGDTTPLLNIMQKLRDPETGCPWDRAQSFQTIVPFTIEEAYEVADTIERMALDELPDELGDLLFQVVFYCQLGKEQ GLFDFNTVVERICDKLTRRHPHVFEGLATTSTDEIKQNWEQLKAIERSERALDSVLDDIPLSLPALSRSIKIQKRVARVG FDWAELPPVVAKIHEEIDEVIFEVEQETVDVQKVQDEMGDLLFAVVNLARHLGVEPEKALRQANHKFERRFRGVEAYAQA DGRAMNEHTLEELDGYWDSVKQDERNK >Mature_266_residues TSLVGDTTPLLNIMQKLRDPETGCPWDRAQSFQTIVPFTIEEAYEVADTIERMALDELPDELGDLLFQVVFYCQLGKEQG LFDFNTVVERICDKLTRRHPHVFEGLATTSTDEIKQNWEQLKAIERSERALDSVLDDIPLSLPALSRSIKIQKRVARVGF DWAELPPVVAKIHEEIDEVIFEVEQETVDVQKVQDEMGDLLFAVVNLARHLGVEPEKALRQANHKFERRFRGVEAYAQAD GRAMNEHTLEELDGYWDSVKQDERNK
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=254, Percent_Identity=57.8740157480315, Blast_Score=300, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 30683; Mature: 30552
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLVGDTTPLLNIMQKLRDPETGCPWDRAQSFQTIVPFTIEEAYEVADTIERMALDELP CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH DELGDLLFQVVFYCQLGKEQGLFDFNTVVERICDKLTRRHPHVFEGLATTSTDEIKQNWE HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH QLKAIERSERALDSVLDDIPLSLPALSRSIKIQKRVARVGFDWAELPPVVAKIHEEIDEV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHH IFEVEQETVDVQKVQDEMGDLLFAVVNLARHLGVEPEKALRQANHKFERRFRGVEAYAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DGRAMNEHTLEELDGYWDSVKQDERNK CCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSLVGDTTPLLNIMQKLRDPETGCPWDRAQSFQTIVPFTIEEAYEVADTIERMALDELP CCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH DELGDLLFQVVFYCQLGKEQGLFDFNTVVERICDKLTRRHPHVFEGLATTSTDEIKQNWE HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH QLKAIERSERALDSVLDDIPLSLPALSRSIKIQKRVARVGFDWAELPPVVAKIHEEIDEV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHH IFEVEQETVDVQKVQDEMGDLLFAVVNLARHLGVEPEKALRQANHKFERRFRGVEAYAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DGRAMNEHTLEELDGYWDSVKQDERNK CCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]