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The map label for this gene is yggT [C]

Identifier: 167623104

GI number: 167623104

Start: 1423121

End: 1423669

Strand: Reverse

Name: yggT [C]

Synonym: Shal_1170

Alternate gene names: 167623104

Gene position: 1423669-1423121 (Counterclockwise)

Preceding gene: 167623105

Following gene: 167623103

Centisome position: 27.24

GC content: 43.53

Gene sequence:

>549_bases
ATGAATGCATTTAGTTTTCTGATAAGCACGGTATTCGATCTATACCTGATGGTCGTGGTATTGCGTATTTGGCTACAATT
AGCCAAAGCCGATTTTTATAACCCATTTAGCCAATTTATCGTAAAAGCCACCCATCCGATTGTAGGCCCAATGAGACGCG
TGTTGCCCTCTTTCGGCAATTTTGATACCGCCTCCTTCGTATTGGCGATAACCGTTGTTATTACAAAATTTGTTGTCTTA
AGCCTGATGGCCGGTGCGGCAATTAATATCCCAACATTATTGCTTGTCTCGCTGGTTTCAGTGATTAAAGAGGCGGGTGT
ACTGCTGTTCTGGATGTTGATCCTACGCGCAATTTTAAGTTGGGTAAGCCAAGGTAGTAACCCAATTGAGATGGTTATGG
GTCAACTAACTGAGCCTTTACTTGCGCCTATTCGCCGCATTTTACCACCAATGGGTGGCCTAGATTTGTCGTTACTGGTA
ATGATGATTATCCTTAACTTCGTCAACATCTTGCTTGCGCAATACGTGCCATTTTGGGCTAGCGTATAG

Upstream 100 bases:

>100_bases
GCTTGGTCGATAGCGCAATGAACAATTGCATCGCCCGCGCCGAAGAGATGGCGAAGCAGTACTAGTTTTTTAATTTAACT
TGAACAAGTAGAGTAAACAG

Downstream 100 bases:

>100_bases
TGACTCCAGCACTAATGCAGCAGGGTGACCTGCTGCTGCAACTCTATATTCAGCCTAAGGCCAGTCGAGATCAAATCGTT
GGCCTACACGGTGAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLAKADFYNPFSQFIVKATHPIVGPMRRVLPSFGNFDTASFVLAITVVITKFVVL
SLMAGAAINIPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPPMGGLDLSLLV
MMIILNFVNILLAQYVPFWASV

Sequences:

>Translated_182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLAKADFYNPFSQFIVKATHPIVGPMRRVLPSFGNFDTASFVLAITVVITKFVVL
SLMAGAAINIPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPPMGGLDLSLLV
MMIILNFVNILLAQYVPFWASV
>Mature_182_residues
MNAFSFLISTVFDLYLMVVVLRIWLQLAKADFYNPFSQFIVKATHPIVGPMRRVLPSFGNFDTASFVLAITVVITKFVVL
SLMAGAAINIPTLLLVSLVSVIKEAGVLLFWMLILRAILSWVSQGSNPIEMVMGQLTEPLLAPIRRILPPMGGLDLSLLV
MMIILNFVNILLAQYVPFWASV

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=174, Percent_Identity=48.2758620689655, Blast_Score=171, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 20211; Mature: 20211

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFSFLISTVFDLYLMVVVLRIWLQLAKADFYNPFSQFIVKATHPIVGPMRRVLPSFGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCC
FDTASFVLAITVVITKFVVLSLMAGAAINIPTLLLVSLVSVIKEAGVLLFWMLILRAILS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSQGSNPIEMVMGQLTEPLLAPIRRILPPMGGLDLSLLVMMIILNFVNILLAQYVPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SV
CC
>Mature Secondary Structure
MNAFSFLISTVFDLYLMVVVLRIWLQLAKADFYNPFSQFIVKATHPIVGPMRRVLPSFGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCC
FDTASFVLAITVVITKFVVLSLMAGAAINIPTLLLVSLVSVIKEAGVLLFWMLILRAILS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSQGSNPIEMVMGQLTEPLLAPIRRILPPMGGLDLSLLVMMIILNFVNILLAQYVPFWA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]