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The map label for this gene is yggU [C]

Identifier: 167623103

GI number: 167623103

Start: 1422834

End: 1423106

Strand: Reverse

Name: yggU [C]

Synonym: Shal_1169

Alternate gene names: 167623103

Gene position: 1423106-1422834 (Counterclockwise)

Preceding gene: 167623104

Following gene: 167623102

Centisome position: 27.23

GC content: 49.82

Gene sequence:

>273_bases
ATGCAGCAGGGTGACCTGCTGCTGCAACTCTATATTCAGCCTAAGGCCAGTCGAGATCAAATCGTTGGCCTACACGGTGA
AGAGATAAAAATCGCCATCACAGCCCCACCTGTCGACGGCAAAGCCAATGCCCACCTCACCAAGTATCTATCTAAAGCCT
TTAAAGTGCCCAAGGGGGATATTGAAATTACCAAAGGCCAGATGGGGCGCCACAAGCAGGTGAAAATCACCGCCCCTAAG
CTTATTCCGGCCGAAGTACAAAACCTTTTGTAA

Upstream 100 bases:

>100_bases
ATTTGTCGTTACTGGTAATGATGATTATCCTTAACTTCGTCAACATCTTGCTTGCGCAATACGTGCCATTTTGGGCTAGC
GTATAGTGACTCCAGCACTA

Downstream 100 bases:

>100_bases
CCTTATAGTTATCATTACAATAGCGCATTGAGTTCAACTAAGCTCTATACTGTTAACAAGATATCTTCTTAAGGAAAACA
AATATGGTCCGTGCTTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIEITKGQMGRHKQVKITAPK
LIPAEVQNLL

Sequences:

>Translated_90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIEITKGQMGRHKQVKITAPK
LIPAEVQNLL
>Mature_90_residues
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGDIEITKGQMGRHKQVKITAPK
LIPAEVQNLL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=85, Percent_Identity=63.5294117647059, Blast_Score=119, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24656569, Length=76, Percent_Identity=36.8421052631579, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 9893; Mature: 9893

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGD
CCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
IEITKGQMGRHKQVKITAPKLIPAEVQNLL
EEEECCCCCCCCEEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MQQGDLLLQLYIQPKASRDQIVGLHGEEIKIAITAPPVDGKANAHLTKYLSKAFKVPKGD
CCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
IEITKGQMGRHKQVKITAPKLIPAEVQNLL
EEEECCCCCCCCEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA