Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623095

Identifier: 167623095

GI number: 167623095

Start: 1413613

End: 1414731

Strand: Reverse

Name: 167623095

Synonym: Shal_1161

Alternate gene names: NA

Gene position: 1414731-1413613 (Counterclockwise)

Preceding gene: 167623098

Following gene: 167623088

Centisome position: 27.07

GC content: 49.69

Gene sequence:

>1119_bases
ATGTCTGAAAATACACCAATTGAGCTAAGTACAGAGATAGGTCCAAACTGGTTTGCCTCGGTTATGGGCACTGGCATCAT
CGCTAATGCCGCTATTGGACTGCCGATGTTCGGTGGCCATTTAAGTGGCATAGGGCTGATTATCTGGTTACTCGCATCCT
TGATGTTAATCACTATGATATTGCTAAAAACGATTCAGACCATTATCAAGCCCCACATTATAAAGCGGCAATTTAACGAT
CCTGTTATGTCGCAATTTTTTGGTGCGCCTCCAATGGCGATGCTTACCATAGCAGGAGGAACCCTATTGTACGGCCAGCA
AGTGATGGCCATTGATACCGCCATTACAATCGCTTGGGGTCTGTGGATAGTGGGGACTCTGCTTGGGCTCGTTACCGCCG
TTATTATTCCGTTTCGTCTTTTTACTCATCATCAAGTCCGCGACGATGCCGCCTTTGGTGGCTGGCTTATGCCCGTCGTT
CCGCCTATGGTCTCAGCCGCTATTGGCGCCATGTTAATCCCCCATGTAGAAAGTATCACCCTACAACAGACGCTGCTTTA
TGCCTGCTATGCCATGTTTGGCATTAGCTTGTTTAGTGCCTTGATTATTATCACAATGATCTGGAGTCGCTTAGCCCACT
CCGGCACATCTGGCGGCGCACGTGTCCCGACTCTTTGGATTGTGTTGGGGCCACTAGGCCAATCAATTACCGCAGCAGGC
GCCCTAGGTAGCGTGGCGCTACTCGTTGTCGACGAACCTATATCGACGGGAATGAATACCATGGCGATTCTTTACGGTGT
TCCAGCCTGGGGCTTTGCTTTTTTCTGGTCGATACTCGCAAGCTTACTGACATTGCGGGCTCTGAGAAGAAAAATGCCCT
TCGCTCTCACTTGGTGGGCGTTTACCTTCCCGGTGGGTACTTGCGTAACCGGAACGACGCAACTGGCGTTACATACTGGC
CTGCCCGCGTTTGAGTGGGCGGCAGTTCTGTTATTTACCGGCTTAATTTTCGCTTGGATTATCGCAGCGATTGGCACTAT
AAAGGGCTTGAAAGGTGGCAAAATCATGAAGAACCCAACCACATCGTCCCATGTCGTTTCTAAAAAAGGCCAGCTCTAA

Upstream 100 bases:

>100_bases
GGGCTTAATGCATACTAAAGTCGATTCAACATTGTACTTATTACCTCAAACGAATTAGCTTTAATAAGATAACGTTAAAC
ATTTAGCGGTAAGGAAATAT

Downstream 100 bases:

>100_bases
CACCTCTATTGAAACGCTATATGTCCACAAGAACCTCGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGCATTTAG
TCGTAATCACCGACATTGGG

Product: C4-dicarboxylate transporter/malic acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSENTPIELSTEIGPNWFASVMGTGIIANAAIGLPMFGGHLSGIGLIIWLLASLMLITMILLKTIQTIIKPHIIKRQFND
PVMSQFFGAPPMAMLTIAGGTLLYGQQVMAIDTAITIAWGLWIVGTLLGLVTAVIIPFRLFTHHQVRDDAAFGGWLMPVV
PPMVSAAIGAMLIPHVESITLQQTLLYACYAMFGISLFSALIIITMIWSRLAHSGTSGGARVPTLWIVLGPLGQSITAAG
ALGSVALLVVDEPISTGMNTMAILYGVPAWGFAFFWSILASLLTLRALRRKMPFALTWWAFTFPVGTCVTGTTQLALHTG
LPAFEWAAVLLFTGLIFAWIIAAIGTIKGLKGGKIMKNPTTSSHVVSKKGQL

Sequences:

>Translated_372_residues
MSENTPIELSTEIGPNWFASVMGTGIIANAAIGLPMFGGHLSGIGLIIWLLASLMLITMILLKTIQTIIKPHIIKRQFND
PVMSQFFGAPPMAMLTIAGGTLLYGQQVMAIDTAITIAWGLWIVGTLLGLVTAVIIPFRLFTHHQVRDDAAFGGWLMPVV
PPMVSAAIGAMLIPHVESITLQQTLLYACYAMFGISLFSALIIITMIWSRLAHSGTSGGARVPTLWIVLGPLGQSITAAG
ALGSVALLVVDEPISTGMNTMAILYGVPAWGFAFFWSILASLLTLRALRRKMPFALTWWAFTFPVGTCVTGTTQLALHTG
LPAFEWAAVLLFTGLIFAWIIAAIGTIKGLKGGKIMKNPTTSSHVVSKKGQL
>Mature_371_residues
SENTPIELSTEIGPNWFASVMGTGIIANAAIGLPMFGGHLSGIGLIIWLLASLMLITMILLKTIQTIIKPHIIKRQFNDP
VMSQFFGAPPMAMLTIAGGTLLYGQQVMAIDTAITIAWGLWIVGTLLGLVTAVIIPFRLFTHHQVRDDAAFGGWLMPVVP
PMVSAAIGAMLIPHVESITLQQTLLYACYAMFGISLFSALIIITMIWSRLAHSGTSGGARVPTLWIVLGPLGQSITAAGA
LGSVALLVVDEPISTGMNTMAILYGVPAWGFAFFWSILASLLTLRALRRKMPFALTWWAFTFPVGTCVTGTTQLALHTGL
PAFEWAAVLLFTGLIFAWIIAAIGTIKGLKGGKIMKNPTTSSHVVSKKGQL

Specific function: Unknown

COG id: COG1275

COG function: function code P; Tellurite resistance protein and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004695
- InterPro:   IPR011552 [H]

Pfam domain/function: PF03595 C4dic_mal_tran [H]

EC number: NA

Molecular weight: Translated: 39786; Mature: 39655

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENTPIELSTEIGPNWFASVMGTGIIANAAIGLPMFGGHLSGIGLIIWLLASLMLITMI
CCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLKTIQTIIKPHIIKRQFNDPVMSQFFGAPPMAMLTIAGGTLLYGQQVMAIDTAITIAWG
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHEECCCHHHHCCCHHHHHHHHHHHHH
LWIVGTLLGLVTAVIIPFRLFTHHQVRDDAAFGGWLMPVVPPMVSAAIGAMLIPHVESIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQQTLLYACYAMFGISLFSALIIITMIWSRLAHSGTSGGARVPTLWIVLGPLGQSITAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHH
ALGSVALLVVDEPISTGMNTMAILYGVPAWGFAFFWSILASLLTLRALRRKMPFALTWWA
HHHCEEEEEECCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
FTFPVGTCVTGTTQLALHTGLPAFEWAAVLLFTGLIFAWIIAAIGTIKGLKGGKIMKNPT
HHHCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
TSSHVVSKKGQL
CCHHHHHCCCCC
>Mature Secondary Structure 
SENTPIELSTEIGPNWFASVMGTGIIANAAIGLPMFGGHLSGIGLIIWLLASLMLITMI
CCCCCEEEECCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLKTIQTIIKPHIIKRQFNDPVMSQFFGAPPMAMLTIAGGTLLYGQQVMAIDTAITIAWG
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHEECCCHHHHCCCHHHHHHHHHHHHH
LWIVGTLLGLVTAVIIPFRLFTHHQVRDDAAFGGWLMPVVPPMVSAAIGAMLIPHVESIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQQTLLYACYAMFGISLFSALIIITMIWSRLAHSGTSGGARVPTLWIVLGPLGQSITAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHH
ALGSVALLVVDEPISTGMNTMAILYGVPAWGFAFFWSILASLLTLRALRRKMPFALTWWA
HHHCEEEEEECCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
FTFPVGTCVTGTTQLALHTGLPAFEWAAVLLFTGLIFAWIIAAIGTIKGLKGGKIMKNPT
HHHCHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
TSSHVVSKKGQL
CCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]